RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 ACAP3Q96P50 834 aa10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 FNBP1Q96RU3 617 aa10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 CCDC94Q9BW85 323 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 IFIH1Q9BYX4 1025 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 TRIM6Q9C030 488 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 NXF3Q9H4D5 531 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 MMRN2Q9H8L6 949 aa10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 PLEKHA5Q9HAU0 1116 aa10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 TMEM8AQ9HCN3 771 aa10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 TOPORSQ9NS56 1045 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 HES2Q9Y543 173 aa10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 IPPQ9Y573 584 aa10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 KIAA0100Q14667 2235 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-223ENST00000636058 LACTBL1A8MY62 500 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 PARNO95453 639 aaKnown RBP10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 C4BPAP04003 597 aaKnown RBP10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 GYPCP04921 128 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 TNNI1P19237 187 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 PON1P27169 355 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 AP3M2P53677 418 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 TRIM14Q14142 442 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 EXOC3L4Q17RC7 722 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 ZACNQ401N2 412 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 EPC2Q52LR7 807 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 PLEKHG4Q58EX7 1191 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 FIGNQ5HY92 759 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 DPY19L2P1Q6NXN4 242 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 ALKAL1Q6UXT8 129 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 GBP6Q6ZN66 633 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 CD302Q8IX05 232 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 EFCAB13Q8IY85 973 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 OR5B17Q8NGF7 314 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 LMO3Q8TAP4 145 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 SNX27Q96L92 541 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 CRACR2AQ9BSW2 395 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 NUP58Q9BVL2 599 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 WNT8AQ9H1J5 351 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 ASB7Q9H672 318 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 PLCB1Q9NQ66 1216 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 FAM105AQ9NUU6 356 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 TMEM39AQ9NV64 488 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 SNTG2Q9NY99 539 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 GCNT4Q9P109 453 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 COQ4Q9Y3A0 265 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 PCDHB2Q9Y5E7 798 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 CITO14578 2027 aa10.38□□□□□ -0.75
CACNA1A-223ENST00000636058 A0A0U1RQF3 1178 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 GOLGA6L6A8MZA4 724 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 EPHB6O15197 1021 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 ZNF623O75123 536 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 RECQL4O94761 1208 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 CXCL10P02778 98 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 NFICP08651 508 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 SLC9A1P19634 815 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 AKAP5P24588 427 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 CYP2C18P33260 490 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 RAB27AP51159 221 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 YARSP54577 528 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 CETN1Q12798 172 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 SCN5AQ14524 2016 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 PDCD11Q14690 1871 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 XKR4Q5GH76 650 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 TDRD10Q5VZ19 366 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 LMBRD2Q68DH5 695 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 TRIM65Q6PJ69 517 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 MRPL10Q7Z7H8 261 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 NT5DC4Q86YG4 428 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 FBXL13Q8NEE6 735 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 TAS1R2Q8TE23 839 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 IQCDQ96DY2 449 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 ADAM2Q99965 735 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 LSM14BQ9BX40 385 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 FTHL17Q9BXU8 183 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 SIX2Q9NPC8 291 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 RGS18Q9NS28 235 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 FAM207AQ9NSI2 230 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 CNTN3Q9P232 1028 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 DERAQ9Y315 318 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 C2CD2Q9Y426 696 aa10.37□□□□□ -0.75
CACNA1A-223ENST00000636058 A0A1W2PQJ5 194 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 C9IYK1 514 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 RNF225M0QZC1 329 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 TULP1O00294 542 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 KIAA0355O15063 1070 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 MFAP3LO75121 409 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 NOL4O94818 638 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 VNN1O95497 513 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 SKIP12755 728 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 ACTN1P12814 892 aa10.36□□□□□ -0.75
CACNA1A-223ENST00000636058 ATF7P17544 494 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms