RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 FAM102BQ5T8I3 360 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 ARMC3Q5W041 872 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 TSHZ3Q63HK5 1081 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 SLC4A10Q6U841 1118 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 DPP8Q6V1X1 898 aaPredicted RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 UBE2Q1Q7Z7E8 422 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 CATIPQ7Z7H3 387 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 SKAP1Q86WV1 359 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 STPG3Q8N7X2 389 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 GIMAP8Q8ND71 665 aaPredicted RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 RPGRQ92834 1020 aaKnown RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 FERMT2Q96AC1 680 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 PGBD4Q96DM1 585 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 PAWRQ96IZ0 340 aaKnown RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 LMF1Q96S06 567 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 NUP88Q99567 741 aaPredicted RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 HERPUD2Q9BSE4 406 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 QRSL1Q9H0R6 528 aaKnown RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 CSRNP2Q9H175 543 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 MTG2Q9H4K7 406 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 RIC8AQ9NPQ8 531 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 KMT5AQ9NQR1 393 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 DNAJC28Q9NX36 388 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 KCMF1Q9P0J7 381 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 SCOCQ9UIL1 159 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 TUBD1Q9UJT1 453 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 PNMA8BQ9ULN7 279 aaPredicted RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 TMCC3Q9ULS5 477 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 EDARQ9UNE0 448 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 LUC7L2Q9Y383 392 aaKnown RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 DAAM1Q9Y4D1 1078 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 CDY2AQ9Y6F7 541 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 ST20-MTHFSA0A0A6YYL1 179 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 KLHL33A6NCF5 533 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 hCG_1984214I3L0E3 225 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 CHL1O00533 1208 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 PRPF3O43395 683 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 SNUPNO95149 360 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 MTHFD2P13995 350 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 TRIM27P14373 513 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 C5AR1P21730 350 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 PSMA3P25788 255 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 HOXC13P31276 330 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 PIK3CAP42336 1068 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 HALP42357 657 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 GLRBP48167 497 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 PPM1FP49593 454 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 EIF5P55010 431 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 LGALS4P56470 323 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 INHBEP58166 350 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ZBED6P86452 979 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 KLF10Q13118 480 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 TOP3AQ13472 1001 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 FHL2Q14192 279 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 USP10Q14694 798 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 EIF4HQ15056 248 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 PUM3Q15397 648 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ZKSCAN8Q15776 578 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ZMAT1Q5H9K5 638 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ANO1Q5XXA6 986 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 CXorf57Q6NSI4 855 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 MMS22LQ6ZRQ5 1243 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 DGKHQ86XP1 1220 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 CLASRPQ8N2M8 674 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 MAGEB6Q8N7X4 407 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ENAHQ8N8S7 591 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 CDYL2Q8N8U2 506 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ANKRD42Q8N9B4 389 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 NUDT10Q8NFP7 164 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 OR5AN1Q8NGI8 311 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 OR14C36Q8NHC7 312 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 JPH3Q8WXH2 748 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 AUTS2Q8WXX7 1259 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 NKD2Q969F2 451 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 TBC1D20Q96BZ9 403 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 NUDT11Q96G61 164 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 FAM89AQ96GI7 184 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ADOQ96SZ5 270 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 FDXACB1Q9BRP7 624 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 KATNBL1Q9H079 304 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 C9orf78Q9NZ63 289 aaPredicted RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 IP6K2Q9UHH9 426 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 DPP7Q9UHL4 492 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF180Q9UJW8 692 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 FBXO10Q9UK96 956 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ZFR2Q9UPR6 939 aaKnown RBP3.46□□□□□ -1.86
PSPC1-208ENST00000635562 ANKRD6Q9Y2G4 727 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 GIT1Q9Y2X7 761 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 PCDHB6Q9Y5E3 794 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 UNC13AQ9UPW8 1703 aa3.46□□□□□ -1.86
PSPC1-208ENST00000635562 A0A0G2JNJ9 132 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 TRIM64CA6NLI5 447 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 GOLGA6L6A8MZA4 724 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 H0Y858 1186 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 PIP5K1CO60331 668 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 NDUFS2O75306 463 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 BAIAP3O94812 1187 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF202O95125 648 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms