RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 LMO3Q8TAP4 145 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 PARD3BQ8TEW8 1205 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 RUBCNQ92622 972 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 TAF4BQ92750 862 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 NELL1Q92832 810 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 CCSER2Q9H7U1 834 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 UBE2TQ9NPD8 197 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-230ENST00000634433 RAB21Q9UL25 225 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 PCDHGC5Q9Y5F6 944 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 CAPN6Q9Y6Q1 641 aa7.72□□□□□ -1.17
BRCA1-230ENST00000634433 A0A0G2JMZ2 1700 aa7.71□□□□□ -1.17
BRCA1-230ENST00000634433 GSTTP1A0A1W2PQM5 241 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 TARSL2A2RTX5 802 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 IFRD1O00458 451 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CES2O00748 559 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 BUB1O43683 1085 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 EXTL3O43909 919 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 RNASEH2AO75792 299 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 GGPS1O95749 300 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ADSSP30520 456 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ARL2P36404 184 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 NOP2P46087 812 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 GCLMP48507 274 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 SLC26A2P50443 739 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CYP24A1Q07973 514 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 PPP3CAQ08209 521 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 GPAT2Q6NUI2 795 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 GJB7Q6PEY0 223 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ENOSF1Q7L5Y1 443 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 PLPPR4Q7Z2D5 763 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 U2AF1L4Q8WU68 220 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 TCP11Q8WWU5 503 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 BSNDQ8WZ55 320 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 OSBPL9Q96SU4 736 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 MCOLN1Q9GZU1 580 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CASS4Q9NQ75 786 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 PCDHB8Q9UN66 801 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 COQ4Q9Y3A0 265 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 PAPPA2Q9BXP8 1791 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 DNAJC25-GNG10A0A024R161 153 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 GOLGA8IPA6NC78 632 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 GOLGA8JA6NMD2 632 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 TISP43B9A030 160 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 K7ERI5 159 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 NOP56O00567 594 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 DDX3XO00571 662 aaKnown RBP eCLIP7.71□□□□□ -1.181e-8■■■□□ 17.6
BRCA1-230ENST00000634433 SORBS3O60504 671 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ZC3H11AO75152 810 aaKnown RBP eCLIP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 PALMO75781 387 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 AP1G2O75843 785 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 PIGRP01833 764 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CETPP11597 493 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ATP4AP20648 1035 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 KLRC1P26715 233 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 EFNA5P52803 228 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 DLG4P78352 724 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 MOGSQ13724 837 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ARHGAP44Q17R89 818 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CFAP221Q4G0U5 840 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CELF3Q5SZQ8 465 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 IER5Q5VY09 327 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 WDR93Q6P2C0 686 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 MOB2Q70IA6 237 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 KRT222Q8N1A0 295 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 SLC30A5Q8TAD4 765 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CAPZA3Q96KX2 299 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 C8orf48Q96LL4 319 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 TMEM117Q9H0C3 514 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 ANKZF1Q9H8Y5 726 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 NENFQ9UMX5 172 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 NOVA2Q9UNW9 492 aaKnown RBP7.71□□□□□ -1.18
BRCA1-230ENST00000634433 CLEC11AQ9Y240 323 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 STYXL1Q9Y6J8 313 aa7.71□□□□□ -1.18
BRCA1-230ENST00000634433 MYH9P35579 1960 aaKnown RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GRID2IPA4D2P6 1211 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 FOXN3O00409 490 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 SRGAP2O75044 1071 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 MAFO75444 373 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 TMEM253P0C7T8 217 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 ZSCAN20P17040 1043 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 TCF7P36402 384 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GPC3P51654 580 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 FKBP1BP68106 108 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 TTLL4Q14679 1199 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 RPS6KA1Q15418 735 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 C1orf220Q5T0J3 134 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 MEI1Q5TIA1 1274 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 PPP4R4Q6NUP7 873 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 CBWD2Q8IUF1 395 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 CREG2Q8IUH2 290 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 MMGT1Q8N4V1 131 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 FBXL13Q8NEE6 735 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 SVIPQ8NHG7 77 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 CTNNBL1Q8WYA6 563 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 FAM212AQ96EL1 285 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 SAAL1Q96ER3 474 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms