RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 C6P13671 934 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 KELP23276 732 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CPA2P48052 419 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ADKP55263 362 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SCAND1P57086 179 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 DDR1Q08345 913 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 COASYQ13057 564 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 UBE3CQ15386 1083 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ANO6Q4KMQ2 910 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CTXN3Q4LDR2 81 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TAF2Q6P1X5 1199 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 FDX2Q6P4F2 183 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ADGRD1Q6QNK2 874 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 MTHFD1LQ6UB35 978 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 DENND5BQ6ZUT9 1274 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TRIM74Q86UV6 250 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TRIM73Q86UV7 250 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 LIX1LQ8IVB5 337 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 HERC6Q8IVU3 1022 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 MIER2Q8N344 545 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 PDCL2Q8N4E4 241 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 FBXO15Q8NCQ5 510 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SPPL3Q8TCT6 385 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 NOC3LQ8WTT2 800 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF764Q96H86 408 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 MAGEB10Q96LZ2 347 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 KCNC2Q96PR1 638 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TRIM7Q9C029 511 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TRIM5Q9C035 493 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 B3GNT4Q9C0J1 378 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 C1orf21Q9H246 121 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 PRDM13Q9H4Q3 707 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TM9SF3Q9HD45 589 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 OBP2BQ9NPH6 170 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CD93Q9NPY3 652 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 DECR2Q9NUI1 292 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 THG1LQ9NWX6 298 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TLR7Q9NYK1 1049 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 USP36Q9P275 1121 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 KCNMB2Q9Y691 235 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 NHSL1Q5SYE7 1610 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SPAG9O60271 1321 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 BLACEA4D250 179 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 GOLGA6L3A6NEY3 463 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CAPN8A6NHC0 703 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 AGAP14A8MT82 685 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ERVH48-1M5A8F1 160 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TRIM38O00635 465 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SYNCRIPO60506 623 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ALDH2P05091 517 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ITGAVP06756 1048 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 PDHBP11177 359 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 MYF5P13349 255 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 RAG1P15918 1043 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CHMP24386 653 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 RXRBP28702 533 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TLX1P31314 330 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 DPP6P42658 865 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CD83Q01151 205 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 MAP4K2Q12851 820 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 DLGAP5Q15398 846 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CLPPQ16740 277 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TMEM266Q2M3C6 531 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SLC35G1Q2M3R5 365 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 LRRFIP1Q32MZ4 808 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SLC9C2Q5TAH2 1124 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 KLHDC7AQ5VTJ3 777 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 METTL11BQ5VVY1 283 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF772Q68DY9 489 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 INTS3Q68E01 1043 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 IKBIPQ70UQ0 350 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CCDC80Q76M96 950 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ATG9AQ7Z3C6 839 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF227Q86WZ6 799 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 KRT73Q86Y46 540 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CRACR2BQ8N4Y2 399 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 LINS1Q8NG48 757 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 RASSF8Q8NHQ8 419 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ETNPPLQ8TBG4 499 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ST8SIA4Q92187 359 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SLC5A5Q92911 643 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 DHTKD1Q96HY7 919 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 VPS50Q96JG6 964 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ZC3H10Q96K80 434 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 LENG8Q96PV6 779 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TCF12Q99081 682 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 C1QTNF2Q9BXJ5 285 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 EMILIN2Q9BXX0 1053 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 GSX2Q9BZM3 304 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TAOK3Q9H2K8 898 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SEMA6BQ9H3T3 888 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 RABEP2Q9H5N1 569 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 TAS2R3Q9NYW6 316 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 UBAP1Q9NZ09 502 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 COQ3Q9NZJ6 369 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 ACTR3BQ9P1U1 418 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CLCA2Q9UQC9 943 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 NPFFR2Q9Y5X5 522 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CLRN2A0PK11 232 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 MEN1O00255 615 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms