RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 CACNA2D1P54289 1103 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
VPS8-228ENST00000628962 FNDC3BQ53EP0 1204 aaKnown RBP4.26□□□□□ -1.73
VPS8-228ENST00000628962 PIK3R6Q5UE93 754 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 EFCAB12Q6NXP0 572 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 Q6ZNX1 250 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 FMNL3Q8IVF7 1028 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 ZZZ3Q8IYH5 903 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 FUBP1Q96AE4 644 aaKnown RBP4.26□□□□□ -1.73
VPS8-228ENST00000628962 Q96MF0 132 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 PSMD1Q99460 953 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 ZMAT4Q9H898 229 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 CAAP1Q9H8G2 361 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 KMT5AQ9NQR1 393 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 FOXJ2Q9P0K8 574 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 TCEAL9Q9UHQ7 104 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 ZMYM3Q14202 1370 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 IKBKBO14920 756 aa4.25□□□□□ -1.73
VPS8-228ENST00000628962 PDE8AO60658 829 aa4.25□□□□□ -1.73
VPS8-228ENST00000628962 DNAJC8O75937 253 aaPredicted RBP4.25□□□□□ -1.73
VPS8-228ENST00000628962 CLEC2LP0C7M8 214 aa4.25□□□□□ -1.73
VPS8-228ENST00000628962 CDKN1CP49918 316 aaPredicted RBP4.25□□□□□ -1.73
VPS8-228ENST00000628962 EVA1CP58658 441 aa4.25□□□□□ -1.73
VPS8-228ENST00000628962 PABPC4Q13310 644 aaKnown RBP eCLIP4.25□□□□□ -1.73
VPS8-228ENST00000628962 THNSL2Q86YJ6 484 aa4.25□□□□□ -1.73
VPS8-228ENST00000628962 PDS5BQ9NTI5 1447 aa4.25□□□□□ -1.73
VPS8-228ENST00000628962 POGKQ9P215 609 aa4.25□□□□□ -1.73
VPS8-228ENST00000628962 ALG1L2C9J202 215 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 ZFPL1O95159 310 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 RAPGEF3O95398 923 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 PFKMP08237 780 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 ELANEP08246 267 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 GPR15P49685 360 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 MXRA7P84157 204 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 EXOSC10Q01780 885 aaKnown RBP4.24□□□□□ -1.73
VPS8-228ENST00000628962 FAM50AQ14320 339 aaKnown RBP4.24□□□□□ -1.73
VPS8-228ENST00000628962 ZNF460Q14592 562 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 BMT2Q1RMZ1 405 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 ZBTB41Q5SVQ8 909 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 AGAP9Q5VTM2 703 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 CERS3Q8IU89 383 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 RNF169Q8NCN4 708 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 TFAP2CQ92754 450 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 PDLIM2Q96JY6 352 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 ORAI3Q9BRQ5 295 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 TOMM22Q9NS69 142 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 KAT6AQ92794 2004 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 ATAD2BQ9ULI0 1458 aa4.24□□□□□ -1.73
VPS8-228ENST00000628962 CCDC194A0A1B0GVG4 234 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 RFPL3O75679 317 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 PROK1P58294 105 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 SRSF4Q08170 494 aaKnown RBP4.23□□□□□ -1.73
VPS8-228ENST00000628962 LRRC32Q14392 662 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 UBE3CQ15386 1083 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 BRDTQ58F21 947 aaPredicted RBP4.23□□□□□ -1.73
VPS8-228ENST00000628962 CCDC178Q5BJE1 867 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 ZNF425Q6IV72 752 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 DDX42Q86XP3 938 aaKnown RBP eCLIP4.23□□□□□ -1.73
VPS8-228ENST00000628962 CCDC146Q8IYE0 955 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 UBR7Q8N806 425 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 ATL2Q8NHH9 583 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 GAB3Q8WWW8 586 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 CDC5LQ99459 802 aaKnown RBP4.23□□□□□ -1.73
VPS8-228ENST00000628962 BRIP1Q9BX63 1249 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 KLK15Q9H2R5 256 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 OXSMQ9NWU1 459 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 GABBR1Q9UBS5 961 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 ZNF70Q9UC06 446 aaPredicted RBP4.23□□□□□ -1.73
VPS8-228ENST00000628962 USP18Q9UMW8 372 aa4.23□□□□□ -1.73
VPS8-228ENST00000628962 KIF21AQ7Z4S6 1674 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 A0A087X0B3 334 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 PLEKHD1A6NEE1 506 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 WIPF3A6NGB9 483 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 DRGXA6NNA5 263 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 OPA1O60313 960 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 NRP2O60462 931 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 CPEP16870 476 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 OCA2Q04671 838 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 MGAT5Q09328 741 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 B3GNTL1Q67FW5 361 aaPredicted RBP4.22□□□□□ -1.73
VPS8-228ENST00000628962 CDCA2Q69YH5 1023 aaPredicted RBP4.22□□□□□ -1.73
VPS8-228ENST00000628962 CNNM4Q6P4Q7 775 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 ZNF788Q6ZQV5 615 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 RNF180Q86T96 592 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 CCAR1Q8IX12 1150 aaKnown RBP4.22□□□□□ -1.73
VPS8-228ENST00000628962 RHOT2Q8IXI1 618 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 TMEM132CQ8N3T6 1108 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 ZFP28Q8NHY6 868 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 FAM126AQ9BYI3 521 aaPredicted RBP4.22□□□□□ -1.73
VPS8-228ENST00000628962 MTFR1LQ9H019 292 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 SLC52A1Q9NWF4 448 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 SLC17A6Q9P2U8 582 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 MAPRE3Q9UPY8 281 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 ATP11BQ9Y2G3 1177 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 EID1Q9Y6B2 187 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 MRC2Q9UBG0 1479 aa4.22□□□□□ -1.73
VPS8-228ENST00000628962 WDR62O43379 1518 aa4.21□□□□□ -1.73
VPS8-228ENST00000628962 GSG1L2A8MUP6 293 aa4.21□□□□□ -1.74
VPS8-228ENST00000628962 PRC1O43663 620 aa4.21□□□□□ -1.74
VPS8-228ENST00000628962 MAP4K4O95819 1239 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms