RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 PPP1R10Q96QC0 940 aaKnown RBP13.3□□□□□ -0.28
UBR1-212ENST00000627960 TARS2Q9BW92 718 aaKnown RBP13.3□□□□□ -0.28
UBR1-212ENST00000627960 MRPL4Q9BYD3 311 aaKnown RBP13.3□□□□□ -0.28
UBR1-212ENST00000627960 RHOBTB2Q9BYZ6 727 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 CDT1Q9H211 546 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
UBR1-212ENST00000627960 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 TGM5O43548 720 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 PAPLNO95428 1278 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 MCF2P10911 925 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 PLS3P13797 630 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
UBR1-212ENST00000627960 SLC12A3P55017 1021 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 RAD51AP2Q09MP3 1159 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
UBR1-212ENST00000627960 TMEM119Q4V9L6 283 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 FAM171A1Q5VUB5 890 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 PRSS55Q6UWB4 352 aaPredicted RBP13.29□□□□□ -0.28
UBR1-212ENST00000627960 ALKAL1Q6UXT8 129 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 CCDC149Q6ZUS6 474 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 OTOP3Q7RTS5 596 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 GLYCTKQ8IVS8 523 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 UBALD2Q8IYN6 164 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 LNX1Q8TBB1 728 aaPredicted RBP13.29□□□□□ -0.28
UBR1-212ENST00000627960 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 ACSF2Q96CM8 615 aaPredicted RBP13.29□□□□□ -0.28
UBR1-212ENST00000627960 AK8Q96MA6 479 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 CCDC94Q9BW85 323 aaPredicted RBP13.29□□□□□ -0.28
UBR1-212ENST00000627960 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 KCND2Q9NZV8 630 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 SORCS3Q9UPU3 1222 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 ZDBF2Q9HCK1 2354 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 DOCK6Q96HP0 2047 aa13.29□□□□□ -0.28
UBR1-212ENST00000627960 SMIM28A0A1B0GU29 152 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 TMEM189-UBE2V1I3L0A0 370 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 ABLIM1O14639 778 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 RFPL2O75678 378 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 BRD1O95696 1058 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 BMP15O95972 392 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 ASGR2P07307 311 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 MYBP10242 640 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 PROZP22891 400 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 SMTNP53814 917 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
UBR1-212ENST00000627960 OSTNP61366 133 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 MTMR3Q13615 1198 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 PSMD5Q16401 504 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 ZNF568Q3ZCX4 644 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 XKR4Q5GH76 650 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 GLRA4Q5JXX5 417 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 DCLRE1AQ6PJP8 1040 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 CD300LGQ6UXG3 332 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 CEP57Q86XR8 500 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 FBXL6Q8N531 539 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 CEP120Q8N960 986 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 TMEM161BQ8NDZ6 487 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 ZNF707Q96C28 371 aaPredicted RBP13.28□□□□□ -0.28
UBR1-212ENST00000627960 UROC1Q96N76 676 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 CLSTN3Q9BQT9 956 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 TCHPQ9BT92 498 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 TOPORSQ9NS56 1045 aaPredicted RBP13.28□□□□□ -0.28
UBR1-212ENST00000627960 DOCK8Q8NF50 2099 aa13.28□□□□□ -0.28
UBR1-212ENST00000627960 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 MAPTP10636 758 aaKnown RBP13.27□□□□□ -0.29
UBR1-212ENST00000627960 FGFR3P22607 806 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 IGFBP6P24592 240 aaPredicted RBP13.27□□□□□ -0.29
UBR1-212ENST00000627960 UBA7P41226 1012 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 CLCNKBP51801 687 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 STRN3Q13033 797 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 UPP1Q16831 310 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 ARSHQ5FYA8 562 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 PDXDC1Q6P996 788 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 MPZL3Q6UWV2 235 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
UBR1-212ENST00000627960 SUGP1Q8IWZ8 645 aaKnown RBP13.27□□□□□ -0.29
UBR1-212ENST00000627960 SMG7Q92540 1137 aaKnown RBP13.27□□□□□ -0.29
UBR1-212ENST00000627960 CALML4Q96GE6 196 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 ZBTB45Q96K62 511 aaPredicted RBP13.27□□□□□ -0.29
UBR1-212ENST00000627960 ACAP3Q96P50 834 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 WDR6Q9NNW5 1121 aaKnown RBP13.27□□□□□ -0.29
UBR1-212ENST00000627960 ZDHHC7Q9NXF8 308 aa13.27□□□□□ -0.29
UBR1-212ENST00000627960 VPS37CA5D8V6 355 aaPredicted RBP13.26□□□□□ -0.29
UBR1-212ENST00000627960 TOM1L1O75674 476 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 ZMYND10O75800 440 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 B3GAT3O94766 335 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 KCNE1P15382 129 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 PDCP20941 246 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
UBR1-212ENST00000627960 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
UBR1-212ENST00000627960 GRIN1Q05586 938 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 SOX4Q06945 474 aaPredicted RBP13.26□□□□□ -0.29
UBR1-212ENST00000627960 SF3A1Q15459 793 aaKnown RBP13.26□□□□□ -0.29
UBR1-212ENST00000627960 ZPBP2Q6X784 338 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 DDX27Q96GQ7 796 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms