RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SIGLEC16A6NMB1 481 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 PDXKO00764 312 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 CHMP2AO43633 222 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 TAL1P17542 331 aaPredicted RBP16.16■□□□□ 0.18
PMS1-221ENST00000624204 NEK3P51956 506 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 OLIG1Q8TAK6 271 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 CHST7Q9NS84 486 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 WASF2Q9Y6W5 498 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 OCRLQ01968 901 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 CNPY1Q3B7I2 92 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 DTNBP1Q96EV8 351 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 PREBQ9HCU5 417 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 TYW1Q9NV66 732 aaKnown RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 WHRNQ9P202 907 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 PDP2Q9P2J9 529 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 EXOC3O60645 756 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 EDF1O60869 148 aaKnown RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 TBCAO75347 108 aaKnown RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 PSMG1O95456 288 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 ASMTLO95671 621 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 GGPS1O95749 300 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 SLURP2P0DP57 97 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 ATF3P18847 181 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 ITIH2P19823 946 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 SSTR3P32745 418 aaPredicted RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 GPC5P78333 572 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 THOC5Q13769 683 aaKnown RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 SEPT7Q16181 437 aaKnown RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 CBWD6Q4V339 395 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 CBWD3Q5JTY5 395 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 CBWD5Q5RIA9 395 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 TMEM63BQ5T3F8 832 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 FYB2Q5VWT5 728 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 ZC3H3Q8IXZ2 948 aaKnown RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 C7orf43Q8WVR3 580 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 C10orf82Q8WW14 230 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 CEP95Q96GE4 821 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 AGPAT1Q99943 283 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 TIPINQ9BVW5 301 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 TRABDQ9H4I3 376 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 GALNT8Q9NY28 637 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 RPA3P35244 121 aaPredicted RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 FMO5P49326 533 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 PICALMQ13492 652 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 CFAP157Q5JU67 520 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 CLNKQ7Z7G1 428 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 WDR60Q8WVS4 1066 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 PTPRN2Q92932 1015 aa16.15■□□□□ 0.18
PMS1-221ENST00000624204 ZNF184Q99676 751 aaPredicted RBP16.15■□□□□ 0.18
PMS1-221ENST00000624204 ASTN1O14525 1302 aa16.14■□□□□ 0.18
PMS1-221ENST00000624204 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 TP73O15350 636 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 CCDC22O60826 627 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 HIBADHP31937 336 aaKnown RBP16.14■□□□□ 0.17
PMS1-221ENST00000624204 CETN2P41208 172 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 KBTBD2Q8IY47 623 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 JDP2Q8WYK2 163 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 SMC6Q96SB8 1091 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 RUSC1Q9BVN2 902 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 C2orf71A6NGG8 1288 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 GAS8O95995 478 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 MTMR2Q13614 643 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 USP17L6PQ6QN14 398 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 OTOAQ7RTW8 1153 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 INTS2Q9H0H0 1204 aaKnown RBP16.14■□□□□ 0.17
PMS1-221ENST00000624204 GRID1Q9ULK0 1009 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
PMS1-221ENST00000624204 HAUS5O94927 633 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 LYNP07948 512 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 C11orf63Q6NUN7 778 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 GATA6Q92908 595 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 WNT8AQ9H1J5 351 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 ARL8BQ9NVJ2 186 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 DNM3Q9UQ16 869 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 C1orf167Q5SNV9 1468 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 ATP8B3O60423 1300 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 CCNFP41002 786 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 SLC12A3P55017 1021 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 HIPK4Q8NE63 616 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 BTBD10Q9BSF8 475 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 FAM192AQ9GZU8 254 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 UBE2TQ9NPD8 197 aaPredicted RBP16.13■□□□□ 0.17
PMS1-221ENST00000624204 APEX2Q9UBZ4 518 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 ESYT2A0FGR8 921 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 ECE2O60344 883 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 PSMC2P35998 433 aaKnown RBP16.13■□□□□ 0.17
PMS1-221ENST00000624204 DEUP1Q05D60 604 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 SLC1A5Q15758 541 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms