RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 HIF1AQ16665 826 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 ARL8AQ96BM9 186 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 TRABDQ9H4I3 376 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 L1RE1Q9UN81 338 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 KRT3P12035 628 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 PITPNM2Q9BZ72 1349 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 BAZ2BQ9UIF8 2168 aaKnown RBP17.11■□□□□ 0.33
GABRB3-215ENST00000622697 MYL3P08590 195 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 STAT5BP51692 787 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 EIF3EP60228 445 aaKnown RBP17.11■□□□□ 0.33
GABRB3-215ENST00000622697 SLC29A2Q14542 456 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 RAB44Q7Z6P3 723 aaPredicted RBP17.11■□□□□ 0.33
GABRB3-215ENST00000622697 ACSF2Q96CM8 615 aaPredicted RBP17.11■□□□□ 0.33
GABRB3-215ENST00000622697 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 GPRC5CQ9NQ84 441 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 EPS15L1Q9UBC2 864 aa17.11■□□□□ 0.33
GABRB3-215ENST00000622697 ARL13BQ3SXY8 428 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 TRIM72Q6ZMU5 477 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 SPATA21Q7Z572 469 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 MXRA8Q9BRK3 442 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 AGPAT3Q9NRZ7 376 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
GABRB3-215ENST00000622697 RGS7P49802 495 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 MDH1BQ5I0G3 518 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 LRIG3Q6UXM1 1119 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 RBBP8NLQ8NC74 664 aaPredicted RBP17.1■□□□□ 0.33
GABRB3-215ENST00000622697 RNF139Q8WU17 664 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 ERP44Q9BS26 406 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 ANGPTL2Q9UKU9 493 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 APOBEC2Q9Y235 224 aaKnown RBP17.1■□□□□ 0.33
GABRB3-215ENST00000622697 AGLP35573 1532 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 FOXN3O00409 490 aaPredicted RBP17.1■□□□□ 0.33
GABRB3-215ENST00000622697 ZWINTO95229 277 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 AGTP01019 485 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 MX2P20592 715 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 XPO6Q96QU8 1125 aaKnown RBP17.1■□□□□ 0.33
GABRB3-215ENST00000622697 UVRAGQ9P2Y5 699 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 SLIT1O75093 1534 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 KIF3CO14782 793 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 PPFIA2O75334 1257 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 NR3C2P08235 984 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 SMARCA1P28370 1054 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 NCOA4Q13772 614 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 HEATR6Q6AI08 1181 aaKnown RBP17.1■□□□□ 0.33
GABRB3-215ENST00000622697 ACER1Q8TDN7 264 aa17.1■□□□□ 0.33
GABRB3-215ENST00000622697 GRAP2O75791 330 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 TTC4O95801 387 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 CDR2Q01850 454 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 TNFAIP2Q03169 654 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 KLF6Q99612 283 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 RTFDC1Q9BY42 306 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 DDX56Q9NY93 547 aaKnown RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 DGAT1O75907 488 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 LCP1P13796 627 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 TWF2Q6IBS0 349 aaKnown RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 KIAA0895Q8NCT3 520 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 FAM161BQ96MY7 647 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 VCX3AQ9NNX9 186 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 DIAPH2O60879 1101 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 PRKCBP05771 671 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 SMTNL2Q2TAL5 461 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 SEZ6Q53EL9 994 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 C1orf146Q5VVC0 180 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 BZW1Q7L1Q6 419 aaKnown RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 NUDCD3Q8IVD9 361 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 KIF12Q96FN5 646 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 CYP4F11Q9HBI6 524 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 A8MXQ7 604 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 SLC1A1P43005 524 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 LRRC31Q6UY01 552 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 CYFIP2Q96F07 1278 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 HUS1O60921 280 aa17.09■□□□□ 0.33
GABRB3-215ENST00000622697 MYCP01106 439 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 SYN2Q92777 582 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-215ENST00000622697 MYOM1P52179 1685 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 WEE2P0C1S8 567 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 ANLNQ9NQW6 1124 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 SUCLA2Q9P2R7 463 aaPredicted RBP17.08■□□□□ 0.33
GABRB3-215ENST00000622697 CPSF3Q9UKF6 684 aaKnown RBP17.08■□□□□ 0.33
GABRB3-215ENST00000622697 NEU2Q9Y3R4 380 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 ANGPTL3Q9Y5C1 460 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 PFDN6O15212 129 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 EIF3DO15371 548 aaKnown RBP eCLIP17.08■□□□□ 0.33
GABRB3-215ENST00000622697 HLA-DRAP01903 254 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 PAPD7Q5XG87 772 aaKnown RBP17.08■□□□□ 0.33
GABRB3-215ENST00000622697 TRIM67Q6ZTA4 783 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 TTC1Q99614 292 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 OSGEPQ9NPF4 335 aa17.08■□□□□ 0.33
GABRB3-215ENST00000622697 ITGA8P53708 1063 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 PRKCEQ02156 737 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 STAT4Q14765 748 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms