RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 PTPN22Q9Y2R2 807 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 PASKQ96RG2 1323 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 RASSF10A6NK89 507 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 PIK3CDO00329 1044 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 RECQL4O94761 1208 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 WEE1P30291 646 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 PLPP4Q5VZY2 271 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 KIAA1524Q8TCG1 905 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 CEP63Q96MT8 703 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 GPR20Q99678 358 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 NT5C1AQ9BXI3 368 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 TSGA10Q9BZW7 698 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 MORF4L1Q9UBU8 362 aa9.71□□□□□ -0.85
HDAC9-229ENST00000622668 CTAGE9A4FU28 777 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 XYLBO75191 536 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 ACO1P21399 889 aaKnown RBP9.71□□□□□ -0.86
HDAC9-229ENST00000622668 SDC4P31431 198 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 VPS41P49754 854 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 ADCY1Q08828 1119 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 PPP2R5CQ13362 524 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 MAPRE1Q15691 268 aaKnown RBP9.71□□□□□ -0.86
HDAC9-229ENST00000622668 SDE2Q6IQ49 451 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 PLPPR4Q7Z2D5 763 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 SKA2Q8WVK7 121 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-229ENST00000622668 MTMR12Q9C0I1 747 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 SUDS3Q9H7L9 328 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-229ENST00000622668 MRPL47Q9HD33 250 aaKnown RBP9.71□□□□□ -0.86
HDAC9-229ENST00000622668 DYRK4Q9NR20 520 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 ASIC3Q9UHC3 531 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
HDAC9-229ENST00000622668 PADI3Q9ULW8 664 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 HPCAL4Q9UM19 191 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 PCDHB2Q9Y5E7 798 aa9.71□□□□□ -0.86
HDAC9-229ENST00000622668 EXTL3O43909 919 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 KRT10P13645 584 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 TRIM32Q13049 653 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 TSTA3Q13630 321 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 SNX17Q15036 470 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 NOMO2Q5JPE7 1267 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 KIAA1755Q5JYT7 1200 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 MIB1Q86YT6 1006 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 DYDC1Q8WWB3 177 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 SECISBP2LQ93073 1101 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 AMFRQ9UKV5 643 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 ACKR2O00590 384 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 BUB1O43683 1085 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 MOCS3O95396 460 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PARNO95453 639 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 HLA-DRAP01903 254 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PPM1AP35813 382 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 NOP14P78316 857 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 GRB14Q14449 540 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 RPS6KA1Q15418 735 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 NFE2Q16621 373 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 CCDC157Q569K6 752 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 C10orf120Q5SQS8 335 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 FAM102AQ5T9C2 384 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 ZNF697Q5TEC3 545 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 OLFML2BQ68BL8 750 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 USP38Q8NB14 1042 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 RSAD2Q8WXG1 361 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 NCAPGQ9BPX3 1015 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PI4K2AQ9BTU6 479 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 TRIM31Q9BZY9 425 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 COL20A1Q9P218 1284 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 TTLL13PA6NNM8 815 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 NDC80O14777 642 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 SPTLC1O15269 473 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 SART1O43290 800 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 HSD17B4P51659 736 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 CRYBB1P53674 252 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 DYNLT1P63172 113 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 GRB10Q13322 594 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 HS1BP3Q53T59 392 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 EARS2Q5JPH6 523 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 C17orf99Q6UX52 265 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 ADAT2Q7Z6V5 191 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 CBWD2Q8IUF1 395 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 KCTD17Q8N5Z5 321 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PPP1R14CQ8TAE6 165 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PARD3BQ8TEW8 1205 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 TRIM11Q96F44 468 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 ATXN3LQ9H3M9 355 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 THAP9Q9H5L6 903 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 PPANQ9NQ55 473 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 CXCL14O95715 111 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 CYP3A4P08684 503 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 RPL10AP62906 217 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 ATP11AP98196 1134 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 NR1H3Q13133 447 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 TDRD10Q5VZ19 366 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 RFX6Q8HWS3 928 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 SYCE1Q8N0S2 351 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 NAP1L3Q99457 506 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 CBWD1Q9BRT8 395 aa9.7□□□□□ -0.86
HDAC9-229ENST00000622668 IQCGQ9H095 443 aaKnown RBP9.7□□□□□ -0.86
HDAC9-229ENST00000622668 BZW2Q9Y6E2 419 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms