RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ADAM2Q99965 735 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 PRDM5Q9NQX1 630 aaPredicted RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 FAM105AQ9NUU6 356 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 PCDHB2Q9Y5E7 798 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 ALPK3Q96L96 1907 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 A0A1W2PQC6 194 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 N4BP1O75113 896 aaKnown RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 PARNO95453 639 aaKnown RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 YARSP54577 528 aaKnown RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 MYL7Q01449 175 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 GPNMBQ14956 572 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 CBWD6Q4V339 395 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 CBWD3Q5JTY5 395 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 CBWD5Q5RIA9 395 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 LMBRD2Q68DH5 695 aaPredicted RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 SMG8Q8ND04 991 aaKnown RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 PCMTD1Q96MG8 357 aaPredicted RBP19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 ERGIC2Q96RQ1 377 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 CRACR2AQ9BSW2 395 aa19.31■□□□□ 0.68
PTCHD3-202ENST00000622555 LACTBL1A8MY62 500 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 GTF2H1P32780 548 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 MXI1P50539 228 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 CLDN10P78369 228 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 SLC10A6Q3KNW5 377 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 SPECC1LQ69YQ0 1117 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 PARP2Q9UGN5 583 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 PTPRJQ12913 1337 aa19.3■□□□□ 0.68
PTCHD3-202ENST00000622555 MEFVO15553 781 aaPredicted RBP19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 RECQL4O94761 1208 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 AKAP5P24588 427 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 RAB27AP51159 221 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 PLEKHG4Q58EX7 1191 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 WDR49Q8IV35 697 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 HACE1Q8IYU2 909 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 SEPT8Q92599 483 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 FAM84AQ96KN4 292 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 TMEM117Q9H0C3 514 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 RNF39Q9H2S5 420 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 TMEM8AQ9HCN3 771 aa19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 PDCD11Q14690 1871 aaKnown RBP19.29■□□□□ 0.68
PTCHD3-202ENST00000622555 TTC26A0AVF1 554 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 GTPBP10A4D1E9 387 aaKnown RBP19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 KLK7P49862 253 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 CETN1Q12798 172 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 KRT39Q6A163 491 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 GBP6Q6ZN66 633 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 DBF4BQ8NFT6 615 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 ZNF516Q92618 1163 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 SNX27Q96L92 541 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 TRAIPQ9BWF2 469 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 FTHL17Q9BXU8 183 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 ASB7Q9H672 318 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 PLEKHA5Q9HAU0 1116 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 GCNT4Q9P109 453 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 SIK3Q9Y2K2 1263 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 ITIH6Q6UXX5 1313 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 TRIM43BA6NCK2 446 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 KIAA0355O15063 1070 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 P4HA2O15460 535 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 IBSPP21815 317 aaPredicted RBP19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 TFAMQ00059 246 aaKnown RBP19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 KCNMA1Q12791 1236 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 EXOC3L4Q17RC7 722 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 COL13A1Q5TAT6 717 aaPredicted RBP19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 SV2AQ7L0J3 742 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 DEFB128Q7Z7B8 93 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 CD302Q8IX05 232 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 EFCAB13Q8IY85 973 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 APBB2Q92870 758 aa19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 TRIM43Q96BQ3 446 aaPredicted RBP19.28■□□□□ 0.68
PTCHD3-202ENST00000622555 A0A0U1RQF3 1178 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 TIMP1P01033 207 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 CXCL10P02778 98 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 NFICP08651 508 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 SKIP12755 728 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 ITGA4P13612 1032 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 AP3M2P53677 418 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 BIRC3Q13489 604 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 JADE1Q6IE81 842 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 OR5B17Q8NGF7 314 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 LSM14BQ9BX40 385 aaKnown RBP19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 RGS18Q9NS28 235 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 KLK14Q9P0G3 267 aa19.27■□□□□ 0.68
PTCHD3-202ENST00000622555 GOLGA6L6A8MZA4 724 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 PMM2O15305 246 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 ZNF623O75123 536 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 TMEM191BP0C7N4 346 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 RAG1P15918 1043 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 TMEM132DQ14C87 1099 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 DUOXA2Q1HG44 320 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 MRPL10Q7Z7H8 261 aaKnown RBP19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 RTN4RL1Q86UN2 441 aaPredicted RBP19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 RNF169Q8NCN4 708 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 LINC01599Q8WXQ3 324 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 ABHD8Q96I13 439 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 ANKRD36BP1Q96IX9 119 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 MTMR12Q9C0I1 747 aa19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 TSPYL2Q9H2G4 693 aaPredicted RBP19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 FAM207AQ9NSI2 230 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms