RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 INTS2Q9H0H0 1204 aaKnown RBP11.55□□□□□ -0.56
CPNE3-212ENST00000621783 RPF1Q9H9Y2 349 aaKnown RBP11.55□□□□□ -0.56
CPNE3-212ENST00000621783 PLCB1Q9NQ66 1216 aa11.55□□□□□ -0.56
CPNE3-212ENST00000621783 CEP72Q9P209 647 aa11.55□□□□□ -0.56
CPNE3-212ENST00000621783 CAPN11Q9UMQ6 739 aa11.55□□□□□ -0.56
CPNE3-212ENST00000621783 MROH7Q68CQ1 1323 aa11.55□□□□□ -0.56
CPNE3-212ENST00000621783 PMM2O15305 246 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 IL18RAPO95256 599 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 CD4P01730 458 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 GHRP10912 638 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 COL6A1P12109 1028 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 TNNI1P19237 187 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 GJA8P48165 433 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 CCZ1BP86790 482 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 POU5F1Q01860 360 aaKnown RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 PAK2Q13177 524 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 SURF1Q15526 300 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 UBXN11Q5T124 520 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 TDRD10Q5VZ19 366 aaKnown RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 C15orf39Q6ZRI6 1047 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 SV2AQ7L0J3 742 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 ANKLE1Q8NAG6 615 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 LMO3Q8TAP4 145 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 CAGE1Q8TC20 777 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 DIS3LQ8TF46 1054 aaKnown RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 CCDC94Q9BW85 323 aaPredicted RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 NXF3Q9H4D5 531 aaKnown RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 AGO3Q9H9G7 860 aaKnown RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 ERVK-5Q9HDB9 667 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 ABHD10Q9NUJ1 306 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 AJAP1Q9UKB5 411 aaPredicted RBP11.54□□□□□ -0.56
CPNE3-212ENST00000621783 ST3GAL5Q9UNP4 418 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 COQ4Q9Y3A0 265 aa11.54□□□□□ -0.56
CPNE3-212ENST00000621783 GPR182O15218 404 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 TLR3O15455 904 aaKnown RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 PQBP1O60828 265 aaKnown RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 C4BPAP04003 597 aaKnown RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 NFICP08651 508 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 CD52P31358 61 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 KRT9P35527 623 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 PIK3CAP42336 1068 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 POLR2FP61218 127 aaKnown RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 ZBED6P86452 979 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 CETN1Q12798 172 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 BIRC3Q13489 604 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 SLC10A6Q3KNW5 377 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 ZACNQ401N2 412 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 KLHDC7AQ5VTJ3 777 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 TWF2Q6IBS0 349 aaKnown RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 PDXDC1Q6P996 788 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 SLC39A5Q6ZMH5 540 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 LRRC8DQ7L1W4 858 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 CACNA2D4Q7Z3S7 1137 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 TMEM139Q8IV31 216 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 CCDC112Q8NEF3 446 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 OR5B17Q8NGF7 314 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 TAS1R2Q8TE23 839 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 BAP1Q92560 729 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 SEMA4DQ92854 862 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 SNX27Q96L92 541 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 PANX2Q96RD6 677 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 MTMR12Q9C0I1 747 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 SNTG2Q9NY99 539 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 PADI3Q9ULW8 664 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 LUC7L2Q9Y383 392 aaKnown RBP11.53□□□□□ -0.56
CPNE3-212ENST00000621783 FHOD1Q9Y613 1164 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 SQORQ9Y6N5 450 aa11.53□□□□□ -0.56
CPNE3-212ENST00000621783 LRRC53A6NM62 1247 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 LACTBL1A8MY62 500 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 LRRN2O75325 713 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 RECQL4O94761 1208 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 TMEM191BP0C7N4 346 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 UCHL3P15374 230 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 SELPP16109 830 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 FECHP22830 423 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 AP3M2P53677 418 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 TFAMQ00059 246 aaKnown RBP11.52□□□□□ -0.57
CPNE3-212ENST00000621783 BFSP2Q13515 415 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 MBTPS1Q14703 1052 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 TRIM60Q495X7 471 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 JADE1Q6IE81 842 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 IQCEQ6IPM2 695 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 GJB7Q6PEY0 223 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 ANKRD33Q7Z3H0 272 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 ARHGEF19Q8IW93 802 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
CPNE3-212ENST00000621783 SMG8Q8ND04 991 aaKnown RBP11.52□□□□□ -0.57
CPNE3-212ENST00000621783 FBXL13Q8NEE6 735 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms