RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 MED19A0JLT2 244 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-225ENST00000621715 JAK2O60674 1132 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 MED24O75448 989 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 RECQL4O94761 1208 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 C8AP07357 584 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 STARD6P59095 220 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 ST3GAL1Q11201 340 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 SNW1Q13573 536 aaKnown RBP18.53■□□□□ 0.56
TARDBP-225ENST00000621715 ME3Q16798 604 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 ELMSAN1Q6PJG2 1045 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 ERMP1Q7Z2K6 904 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 NOSTRINQ8IVI9 506 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 C1orf210Q8IVY1 113 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 KIAA2013Q8IYS2 634 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 PIK3R5Q8WYR1 880 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 FGF13Q92913 245 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 TTPALQ9BTX7 342 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 CDH7Q9ULB5 785 aa18.53■□□□□ 0.56
TARDBP-225ENST00000621715 NEMFO60524 1076 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 XBP1P17861 261 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 RFX1P22670 979 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 PSMD5Q16401 504 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 CATSPER3Q86XQ3 398 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 HACE1Q8IYU2 909 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 KIFC3Q9BVG8 833 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 CCDC113Q9H0I3 377 aa18.52■□□□□ 0.56
TARDBP-225ENST00000621715 NRG2O14511 850 aaPredicted RBP18.51■□□□□ 0.55
TARDBP-225ENST00000621715 CD72P21854 359 aa18.51■□□□□ 0.55
TARDBP-225ENST00000621715 FAM187BQ17R55 369 aa18.51■□□□□ 0.55
TARDBP-225ENST00000621715 NSUN7Q8NE18 718 aaKnown RBP18.51■□□□□ 0.55
TARDBP-225ENST00000621715 SLC7A14Q8TBB6 771 aa18.51■□□□□ 0.55
TARDBP-225ENST00000621715 KXD1Q9BQD3 176 aa18.51■□□□□ 0.55
TARDBP-225ENST00000621715 DDX23Q9BUQ8 820 aaKnown RBP18.51■□□□□ 0.55
TARDBP-225ENST00000621715 SPTBN2O15020 2390 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 SHISA7A6NL88 538 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 GLRA4Q5JXX5 417 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 PPM1LQ5SGD2 360 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 DIS3L2Q8IYB7 885 aaKnown RBP18.5■□□□□ 0.55
TARDBP-225ENST00000621715 SUMF1Q8NBK3 374 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 C3orf58Q8NDZ4 430 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 ING5Q8WYH8 240 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 GTF3C6Q969F1 213 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 PRMT7Q9NVM4 692 aaPredicted RBP18.5■□□□□ 0.55
TARDBP-225ENST00000621715 DNMT3BQ9UBC3 853 aaKnown RBP18.5■□□□□ 0.55
TARDBP-225ENST00000621715 POLIQ9UNA4 740 aa18.5■□□□□ 0.55
TARDBP-225ENST00000621715 I3L4J1 428 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 THP07101 528 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 HNRNPA1P09651 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
TARDBP-225ENST00000621715 LIG1P18858 919 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 ATP2B1P20020 1258 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 OR1D2P34982 312 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 CREMQ03060 361 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 ECM1Q16610 540 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 SLC5A9Q2M3M2 681 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
TARDBP-225ENST00000621715 NPAS3Q8IXF0 933 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 CCDC43Q96MW1 224 aaKnown RBP18.49■□□□□ 0.55
TARDBP-225ENST00000621715 PLA2G2FQ9BZM2 168 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 SEMA4AQ9H3S1 761 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 GOLGA2P5Q9HBQ8 144 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 GDAQ9Y2T3 454 aa18.49■□□□□ 0.55
TARDBP-225ENST00000621715 PRKCBP05771 671 aa18.48■□□□□ 0.55
TARDBP-225ENST00000621715 XRCC6P12956 609 aaKnown RBP eCLIP18.48■□□□□ 0.55
TARDBP-225ENST00000621715 FGFR3P22607 806 aa18.48■□□□□ 0.55
TARDBP-225ENST00000621715 HOXA9P31269 272 aa18.48■□□□□ 0.55
TARDBP-225ENST00000621715 MCM7P33993 719 aa18.48■□□□□ 0.55
TARDBP-225ENST00000621715 PRPF4BQ13523 1007 aaKnown RBP18.48■□□□□ 0.55
TARDBP-225ENST00000621715 RAB33AQ14088 237 aa18.48■□□□□ 0.55
TARDBP-225ENST00000621715 MLF2Q15773 248 aaPredicted RBP18.48■□□□□ 0.55
TARDBP-225ENST00000621715 NT5DC1Q5TFE4 455 aa18.48■□□□□ 0.55
TARDBP-225ENST00000621715 LIN9Q5TKA1 542 aa18.48■□□□□ 0.55
TARDBP-225ENST00000621715 ZFP37Q9Y6Q3 630 aaPredicted RBP18.48■□□□□ 0.55
TARDBP-225ENST00000621715 KANSL1LA0AUZ9 987 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 N4BP3O15049 544 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 TKTP29401 623 aaKnown RBP18.47■□□□□ 0.55
TARDBP-225ENST00000621715 CLCNKBP51801 687 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 SOX4Q06945 474 aaPredicted RBP18.47■□□□□ 0.55
TARDBP-225ENST00000621715 SLC44A4Q53GD3 710 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 PADI6Q6TGC4 694 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 CEP120Q8N960 986 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 WASF1Q92558 559 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 PPP1R10Q96QC0 940 aaKnown RBP18.47■□□□□ 0.55
TARDBP-225ENST00000621715 TUFT1Q9NNX1 390 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 MTRRQ9UBK8 725 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 CDY1Q9Y6F8 540 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 F5P12259 2224 aa18.47■□□□□ 0.55
TARDBP-225ENST00000621715 COL4A2P08572 1712 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 ACKR2O00590 384 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
TARDBP-225ENST00000621715 CYP11B2P19099 503 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 BRCC3P46736 316 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 GUCY1B3Q02153 619 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 FZD5Q13467 585 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.46■□□□□ 0.55
TARDBP-225ENST00000621715 ZBTB8OSQ8IWT0 167 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 MCPH1Q8NEM0 835 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
TARDBP-225ENST00000621715 BRMS1Q9HCU9 246 aa18.46■□□□□ 0.55
TARDBP-225ENST00000621715 FAM170BA6NMN3 283 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms