RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 CCDC13Q8IYE1 715 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 MICALL1Q8N3F8 863 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 ARFGAP2Q8N6H7 521 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 ANKLE1Q8NAG6 615 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 RDH13Q8NBN7 331 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 AGBL3Q8NEM8 1001 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 MDM1Q8TC05 714 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 EPS8L3Q8TE67 593 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 ZNF526Q8TF50 670 aaPredicted RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 UBLCP1Q8WVY7 318 aaPredicted RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 CCT6BQ92526 530 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 ZNF516Q92618 1163 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 MAGOHBQ96A72 148 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 ZNF653Q96CK0 615 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 GPRASP2Q96D09 838 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 FAM212AQ96EL1 285 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 SAAL1Q96ER3 474 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 DDX27Q96GQ7 796 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 CAMKK2Q96RR4 588 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 NAP1L3Q99457 506 aaPredicted RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 SH2D3AQ9BRG2 576 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 KIFC3Q9BVG8 833 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 NUP85Q9BW27 656 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 ZNF341Q9BYN7 854 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 TRIM31Q9BZY9 425 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 DCLK3Q9C098 648 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 PDGFDQ9GZP0 370 aaPredicted RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 KIAA1683Q9H0B3 1180 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 RAB17Q9H0T7 212 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 WNT8AQ9H1J5 351 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 PABPC3Q9H361 631 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 SEMA4AQ9H3S1 761 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 AZI2Q9H6S1 392 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 LRRC19Q9H756 370 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 TMEM206Q9H813 350 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 CNOT10Q9H9A5 744 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 EFCC1Q9HA90 598 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 RAVER2Q9HCJ3 691 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 TBC1D22BQ9NU19 505 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 MAP3K20Q9NYL2 800 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.47□□□□□ -1.85
U1.39-201ENST00000621562 TMOD2Q9NZR1 351 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 PKD2L1Q9P0L9 805 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 CTTNBP2NLQ9P2B4 639 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 LARSQ9P2J5 1176 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 UVRAGQ9P2Y5 699 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 DDX20Q9UHI6 824 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 LGALS13Q9UHV8 139 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 CNOT7Q9UIV1 285 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 TBX20Q9UMR3 447 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 NOVA2Q9UNW9 492 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 CNTN6Q9UQ52 1028 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 R3HDM2Q9Y2K5 976 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 ZBTB12Q9Y330 459 aaPredicted RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 UTP11Q9Y3A2 253 aaKnown RBP3.47□□□□□ -1.85
U1.39-201ENST00000621562 STYXL1Q9Y6J8 313 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 UTRNP46939 3433 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 TTC3P53804 2025 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
U1.39-201ENST00000621562 ZNF541Q9H0D2 1346 aa3.46□□□□□ -1.85
U1.39-201ENST00000621562 ANKRD36A6QL64 1941 aa3.46□□□□□ -1.85
U1.39-201ENST00000621562 NYNRINQ9P2P1 1898 aaKnown RBP3.46□□□□□ -1.86
U1.39-201ENST00000621562 GOLGA6L10A0A0M3HER8 536 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 DENND3A2RUS2 1198 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 GMNCA6NCL1 334 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 VGLL3A8MV65 326 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 WDR64B1ANS9 1081 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 NFKBIEO00221 500 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 TULP1O00294 542 aaPredicted RBP3.46□□□□□ -1.86
U1.39-201ENST00000621562 WNT10BO00744 389 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 ABLIM1O14639 778 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 CLDN3O15551 220 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 FAM189A1O60320 539 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 ZC3H11AO75152 810 aaKnown RBP eCLIP3.46□□□□□ -1.86
U1.39-201ENST00000621562 DNAJC8O75937 253 aaPredicted RBP3.46□□□□□ -1.86
U1.39-201ENST00000621562 PROSCO94903 275 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 AGTP01019 485 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 HLA-DRAP01903 254 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 C4BPAP04003 597 aaKnown RBP3.46□□□□□ -1.86
U1.39-201ENST00000621562 DLATP10515 647 aaKnown RBP3.46□□□□□ -1.86
U1.39-201ENST00000621562 GHRP10912 638 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 CETPP11597 493 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 RARGP13631 454 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 CHN1P15882 459 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 CREB1P16220 341 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 DPEP1P16444 411 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 ATP4AP20648 1035 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 GARTP22102 1010 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 FGFR4P22455 802 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 KLRC2P26717 231 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 GCAP28676 217 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 CNGA1P29973 690 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 HNRNPH1P31943 449 aaKnown RBP3.46□□□□□ -1.86
U1.39-201ENST00000621562 SFNP31947 248 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 GBP1P32455 592 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 SCTRP47872 440 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 KCNJ1P48048 391 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 SMTNP53814 917 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 PLTPP55058 493 aa3.46□□□□□ -1.86
U1.39-201ENST00000621562 MFAP3P55082 362 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms