RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 MXI1P50539 228 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 RCN1Q15293 331 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 RRM2BQ7LG56 351 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 ERICH1Q86X53 443 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 TMEM161AQ9NX61 479 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 PNMA3Q9UL41 463 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 B2RBV5 119 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 CYP27B1O15528 508 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 MMP1P03956 469 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 AARS2Q5JTZ9 985 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 SYCP2LQ5T4T6 812 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 NANOGNBQ7Z5D8 188 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 AK8Q96MA6 479 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 TMCC1O94876 653 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 GPSM2P81274 684 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 MAPRE1Q15691 268 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 IZUMO3Q5VZ72 239 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 GLMNQ92990 594 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 XPO6Q96QU8 1125 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 GINS4Q9BRT9 223 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 GOLPH3LQ9H4A5 285 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 ADGRG1Q9Y653 693 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 SOS2Q07890 1332 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 PITPNM2Q9BZ72 1349 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 CPSF1Q10570 1443 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 CELF2O95319 508 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 TTLL1O95922 423 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 PDHBP11177 359 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 PLIN5Q00G26 463 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 KRT33BQ14525 404 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 KIAA1841Q6NSI8 718 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 IFNEQ86WN2 208 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 NGRNQ9NPE2 291 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 DAPK2Q9UIK4 370 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 FAM200BP0CF97 657 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 DHX40Q8IX18 779 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 VPS50Q96JG6 964 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 NUP85Q9BW27 656 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 FSD1LQ9BXM9 530 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 CEP72Q9P209 647 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 HERC5Q9UII4 1024 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 SRPRBQ9Y5M8 271 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 MXD4Q14582 209 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 MTF1Q14872 753 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 VPS72Q15906 364 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 PRAMEF18Q5VWM3 479 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 C16orf89Q6UX73 402 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 TBCKQ8TEA7 893 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 ANKRD7Q92527 254 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 DYNLL2Q96FJ2 89 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 MPP4Q96JB8 637 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF577Q9BSK1 485 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 RANBP17Q9H2T7 1088 aaKnown RBP10.43□□□□□ -0.74
COL4A6-210ENST00000621266 SERPINB13Q9UIV8 391 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 IQGAP3Q86VI3 1631 aa10.43□□□□□ -0.74
COL4A6-210ENST00000621266 H7C1W4 665 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 TYK2P29597 1187 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 CHRNA3P32297 505 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 C16orf72Q14CZ0 275 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 PRPF39Q86UA1 669 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 OR8H2Q8N162 312 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 SPATA4Q8NEY3 305 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 RBM41Q96IZ5 413 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 BSDC1Q9NW68 430 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 TYW5A2RUC4 315 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 ACADSP16219 412 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 GPC5P78333 572 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 CUL4AQ13619 759 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 PTK2BQ14289 1009 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 PPP1R2P3Q6NXS1 205 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 C4orf33Q8N1A6 199 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 ST13P5Q8NFI4 369 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 MRPL1Q9BYD6 325 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 DHX36Q9H2U1 1008 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 KCNF1Q9H3M0 494 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 LRRC4Q9HBW1 653 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 SCN3BQ9NY72 215 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 MIF4GDA9UHW6 222 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 KLHL18O94889 574 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 AGTP01019 485 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 IRAK1P51617 712 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 TRIM69Q86WT6 500 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 CCDC60Q8IWA6 550 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 NFKBIL1Q9UBC1 381 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 FAM196BA6NMK8 535 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 AP1G2O75843 785 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 SMNDC1O75940 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 TRIM49P0CI25 452 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 TRIM49CP0CI26 452 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 RNPC3Q96LT9 517 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 IL1RL2Q9HB29 575 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 ETAA1Q9NY74 926 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 SPATA2Q9UM82 520 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 TCF3P15923 654 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 KPNB1Q14974 876 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms