RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 CDX2Q99626 313 aaPredicted RBP9.42□□□□□ -0.9
GTF2I-219ENST00000621040 FDXACB1Q9BRP7 624 aaPredicted RBP9.42□□□□□ -0.9
GTF2I-219ENST00000621040 RAB34Q9BZG1 259 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 NT5C3AQ9H0P0 336 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 VPS18Q9P253 973 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 A0A087X0B3 334 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 M0QZ92 97 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 SNUPNO95149 360 aaKnown RBP9.42□□□□□ -0.9
GTF2I-219ENST00000621040 PIGRP01833 764 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 ADRB2P07550 413 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 XKR4Q5GH76 650 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 FBXW10Q5XX13 1052 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 DNAJC14Q6Y2X3 702 aaPredicted RBP9.42□□□□□ -0.9
GTF2I-219ENST00000621040 CCDC73Q6ZRK6 1079 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 LRRC55Q6ZSA7 311 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 RNF168Q8IYW5 571 aaPredicted RBP9.42□□□□□ -0.9
GTF2I-219ENST00000621040 MICAL1Q8TDZ2 1067 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 PSPC1Q8WXF1 523 aaKnown RBP9.42□□□□□ -0.9
GTF2I-219ENST00000621040 RUSC1Q9BVN2 902 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 PLVAPQ9BX97 442 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 DNAI1Q9UI46 699 aa9.42□□□□□ -0.9
GTF2I-219ENST00000621040 PPFIA2O75334 1257 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 PHKA2P46019 1235 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 TMEM62Q0P6H9 643 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 TBX2Q13207 712 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 XKR9Q5GH70 373 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 CLLU1OSQ5K130 101 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 SPRED2Q7Z698 418 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 CEP57L1Q8IYX8 460 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 PIGOQ8TEQ8 1089 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 P2RX5Q93086 422 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 THOC1Q96FV9 657 aaKnown RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 GCOM2Q9BZD3 368 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 VWA3AA6NCI4 1184 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 PPP1R37O75864 691 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 CA3P07451 260 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 POLGP54098 1239 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 FANCCQ00597 558 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 EHHADHQ08426 723 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 LONRF2Q1L5Z9 754 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 RESP18Q5W5W9 173 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 Q7L0L9 218 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 KSR1Q8IVT5 923 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 DEFB123Q8N688 67 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 SNX29Q8TEQ0 813 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 RAD54LQ92698 747 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 KIFAP3Q92845 792 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 TMEM143Q96AN5 459 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 CPSF2Q9P2I0 782 aaKnown RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 IMPACTQ9P2X3 320 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 MSRAQ9UJ68 235 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 A0A1B0GUA9 196 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 EME2A4GXA9 379 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 FAM189A1O60320 539 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 PECAM1P16284 738 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 CCT6AP40227 531 aaKnown RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 CD151P48509 253 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 RAB27AP51159 221 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 MCCD1P59942 119 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 BRD3Q15059 726 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 RBBP5Q15291 538 aaKnown RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 NAB2Q15742 525 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 SPECC1Q5M775 1068 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 APTXQ7Z2E3 356 aaKnown RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 TMCO2Q7Z6W1 182 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 TRIM74Q86UV6 250 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 TRIM73Q86UV7 250 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 TMEM174Q8WUU8 243 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 SH2D3AQ9BRG2 576 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 INO80BQ9C086 356 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 CSRNP2Q9H175 543 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 POLR3FQ9H1D9 316 aaPredicted RBP9.41□□□□□ -0.9
GTF2I-219ENST00000621040 ODF2LQ9ULJ1 636 aa9.41□□□□□ -0.9
GTF2I-219ENST00000621040 H3BNC9 293 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
GTF2I-219ENST00000621040 SFPQP23246 707 aaKnown RBP eCLIP9.4□□□□□ -0.9
GTF2I-219ENST00000621040 FNTAP49354 379 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 DNM2P50570 870 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 STK17AQ9UEE5 414 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 AKT3Q9Y243 479 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 RWDD3Q9Y3V2 267 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 C2orf16Q68DN1 1984 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 BECN2A8MW95 431 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 E9PMD0 336 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 MEFVO15553 781 aaPredicted RBP9.4□□□□□ -0.9
GTF2I-219ENST00000621040 RB1P06400 928 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 CAMK1Q14012 370 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 USP49Q70CQ1 688 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 KCNG4Q8TDN1 519 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 RABGGTAQ92696 567 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 DNAJC19Q96DA6 116 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 LMAN2LQ9H0V9 348 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 MTCH2Q9Y6C9 303 aa9.4□□□□□ -0.9
GTF2I-219ENST00000621040 KIF26AQ9ULI4 1882 aaPredicted RBP9.4□□□□□ -0.9
GTF2I-219ENST00000621040 IKBKBO14920 756 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms