RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ECHS1P30084 290 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 CBX3Q13185 183 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 LRRC14Q15048 493 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 DLGAP5Q15398 846 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 MAP7D1Q3KQU3 841 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 STRIP1Q5VSL9 837 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 ZNF572Q7Z3I7 529 aaPredicted RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 SLC47A2Q86VL8 602 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 SPATS2Q86XZ4 545 aaKnown RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 SYCE1Q8N0S2 351 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 C1orf54Q8WWF1 131 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 MKL1Q969V6 931 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 PLIN4Q96Q06 1357 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 GOLGA6L10A0A0M3HER8 536 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 LDHAP00338 332 aaKnown RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 CYP3A4P08684 503 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 LMNB1P20700 586 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 INHBCP55103 352 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 BFSP1Q12934 665 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 ITGB3BPQ13352 177 aaPredicted RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 RASIP1Q5U651 963 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 DPY19L2P1Q6NXN4 242 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 CBWD2Q8IUF1 395 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 RFFLQ8WZ73 363 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 TEKT3Q9BXF9 490 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 KCNH7Q9NS40 1196 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 SUN2Q9UH99 717 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 DBR1Q9UK59 544 aaKnown RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 PSMD10O75832 226 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 ACSL3O95573 720 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 HARSP12081 509 aaKnown RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 ITGB5P18084 799 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 TMED1Q13445 227 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 XKR9Q5GH70 373 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 HP1BP3Q5SSJ5 553 aaPredicted RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 ANO7Q6IWH7 933 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 SPATA17Q96L03 361 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 DHRS1Q96LJ7 313 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 HEMGNQ9BXL5 484 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 ZNF341Q9BYN7 854 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 TRIM7Q9C029 511 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 SUGT1Q9Y2Z0 365 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 ZMYM2Q9UBW7 1377 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 COMTP21964 271 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 ALDH3A1P30838 453 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 CETN1Q12798 172 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 SLC29A2Q14542 456 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 PRAMEF18Q5VWM3 479 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 TATDN1Q6P1N9 297 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 CCNJLQ8IV13 435 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 ACTRT1Q8TDG2 376 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 CRYGNQ8WXF5 182 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 DDX50Q9BQ39 737 aaKnown RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 TMBIM4Q9HC24 238 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 CD2APQ9Y5K6 639 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 TBX3O15119 743 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 RGL2O15211 777 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 GAP43P17677 238 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 HSPA1LP34931 641 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 SERPINB4P48594 390 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 VAMP7P51809 220 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 JAM2P57087 298 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 IFI35P80217 286 aaPredicted RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 CUL1Q13616 776 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 FAM182AQ5T1J6 154 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 C6orf89Q6UWU4 347 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 KDM7AQ6ZMT4 941 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 STXBP4Q6ZWJ1 553 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 TAB3Q8N5C8 712 aaPredicted RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 UCMAQ8WVF2 138 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 ATG4AQ8WYN0 398 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 OPTNQ96CV9 577 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 ERLEC1Q96DZ1 483 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 AGPAT1Q99943 283 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 LARSQ9P2J5 1176 aaKnown RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 TBK1Q9UHD2 729 aa11.42□□□□□ -0.58
CDH1-214ENST00000621016 TRPC5Q9UL62 973 aaPredicted RBP11.42□□□□□ -0.58
CDH1-214ENST00000621016 BTAF1O14981 1849 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 HMGB1P1B2RPK0 211 aaPredicted RBP11.41□□□□□ -0.58
CDH1-214ENST00000621016 MMEP08473 750 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 VIMP08670 466 aaKnown RBP11.41□□□□□ -0.58
CDH1-214ENST00000621016 BCRP11274 1271 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 HSPA9P38646 679 aaKnown RBP11.41□□□□□ -0.58
CDH1-214ENST00000621016 XRCC4Q13426 336 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 MTM1Q13496 603 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 C10orf76Q5T2E6 689 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 TMC3Q7Z5M5 1100 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 YTHDF3Q7Z739 585 aaKnown RBP11.41□□□□□ -0.58
CDH1-214ENST00000621016 DAW1Q8N136 415 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 PWWP2AQ96N64 755 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 COL20A1Q9P218 1284 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 SUCLA2Q9P2R7 463 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms