RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 FZD8Q9H461 694 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 GABRQQ9UN88 632 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 GINS2Q9Y248 185 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 RBAK-RBAKDNI3L0D1 243 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 SMIM10L2AP0DMW4 78 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 SMIM10L2BP0DMW5 78 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 PRKCIP41743 596 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 CPT1AP50416 773 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 OSTNP61366 133 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 LACTBP83111 547 aaPredicted RBP13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 NT5C1BQ96P26 610 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 LUC7LQ9NQ29 371 aaKnown RBP13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 RRN3P2A6NIE6 340 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 F2P00734 622 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 PIK3CAP42336 1068 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 TMEM62Q0P6H9 643 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 EEF1DP3Q658K8 133 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 MPZL3Q6UWV2 235 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 TSHZ1Q6ZSZ6 1077 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 NOA1Q8NC60 698 aaKnown RBP13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 KAT2BQ92831 832 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 VTI1AQ96AJ9 217 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 PSMB7Q99436 277 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 PARD6BQ9BYG5 372 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 PRMT7Q9NVM4 692 aaPredicted RBP13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 COQ4Q9Y3A0 265 aa13.71□□□□□ -0.21
TNFAIP3-209ENST00000619035 OGTO15294 1046 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 RHOXF2BP0C7M4 288 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 GPC3P51654 580 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 MFAP3P55082 362 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 NAP1L1P55209 391 aaKnown RBP13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CDC42EP1Q00587 391 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 MCL1Q07820 350 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 MFSD10Q14728 455 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 TDRD10Q5VZ19 366 aaKnown RBP13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CEP112Q8N8E3 955 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CPB2Q96IY4 423 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CAPNS2Q96L46 248 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 RHOXF2Q9BQY4 288 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 MYH10P35580 1976 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CASP8AP2Q9UKL3 1982 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 ABLIM1O14639 778 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 NCK2O43639 380 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 ZEB2O60315 1214 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 FAM189A1O60320 539 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 AKR1A1P14550 325 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 FLT3LGP49771 235 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 PRKCZQ05513 592 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 KIF22Q14807 665 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 KIZQ2M2Z5 673 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 BRSK2Q8IWQ3 736 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 KIAA0319LQ8IZA0 1049 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CEP120Q8N960 986 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 TRIB2Q92519 343 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 TATDN2Q93075 761 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 KREMEN1Q96MU8 473 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 MMS19Q96T76 1030 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 CGRRF1Q99675 332 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 NAGPAQ9UK23 515 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 SAR1BQ9Y6B6 198 aa13.7□□□□□ -0.22
TNFAIP3-209ENST00000619035 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CNTNAP2Q9UHC6 1331 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 KPNA6O60684 536 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 PHACTR2O75167 634 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 HLA-DRAP01903 254 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 C6orf222P0C671 652 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 APLP1P51693 650 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CLDN10P78369 228 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 WHAMMP3Q1A5X7 153 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 ZACNQ401N2 412 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 ALKBH5Q6P6C2 394 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 TRPV1Q8NER1 839 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 HELQQ8TDG4 1101 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 U2AF1L4Q8WU68 220 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 ZBTB9Q96C00 473 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 ANKZF1Q9H8Y5 726 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CTAGE15A4D2H0 777 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 C4BPAP04003 597 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CTAGE8P0CG41 777 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 FGFR4P22455 802 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 PROZP22891 400 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CXCR5P32302 372 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms