RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 FAF2Q96CS3 445 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 SLC38A10Q9HBR0 1119 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 KLHL11Q9NVR0 708 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 ARSEP51690 589 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 SLC12A3P55017 1021 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 CCNYQ8ND76 341 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 C9orf72Q96LT7 481 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 PRMT1Q99873 361 aaKnown RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 DBR1Q9UK59 544 aaKnown RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 TBX20Q9UMR3 447 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 DCTN3O75935 186 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 CAP2P40123 477 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 GARSP41250 739 aaKnown RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 AARSP49588 968 aaKnown RBP eCLIP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 PPP6R3Q5H9R7 873 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 FBXW10Q5XX13 1052 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 ZFPM1Q8IX07 1006 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 RBBP8NLQ8NC74 664 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 SNX25Q9H3E2 840 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 SSX2IPQ9Y2D8 614 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 CIITAP33076 1130 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 COILP38432 576 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 IREB2P48200 963 aaKnown RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 PTF1AQ7RTS3 328 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 AFAP1L2Q8N4X5 818 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 ASNSD1Q9NWL6 643 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 DDX56Q9NY93 547 aaKnown RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 IGSF9BQ9UPX0 1349 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 CDH16O75309 829 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 SGPL1O95470 568 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 STAT5BP51692 787 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 EFNA5P52803 228 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 DDR1Q08345 913 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 NPY5RQ15761 445 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 BAP1Q92560 729 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 SEC16BQ96JE7 1060 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 OSBPL8Q9BZF1 889 aa14.76□□□□□ -0.05
CNOT3-210ENST00000618939 PABPC3Q9H361 631 aaKnown RBP14.76□□□□□ -0.05
CNOT3-210ENST00000618939 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 KRT37O76014 449 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 HNRNPH3P31942 346 aaKnown RBP14.75□□□□□ -0.05
CNOT3-210ENST00000618939 NCOA4Q13772 614 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 EMC2Q15006 297 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 KLHL38Q2WGJ6 581 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 KCNMB3Q9NPA1 279 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 SPEF2Q9C093 1822 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 SETD1AO15047 1707 aaKnown RBP14.75□□□□□ -0.05
CNOT3-210ENST00000618939 TCP11X1B4DZS4 312 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 EML1O00423 815 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 MAFGO15525 162 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 SLITRK3O94933 977 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 BAG2O95816 211 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 KCNMA1Q12791 1236 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 DPY19L2Q6NUT2 758 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 APOBEC3FQ8IUX4 373 aaKnown RBP14.75□□□□□ -0.05
CNOT3-210ENST00000618939 RNF149Q8NC42 400 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 RNF169Q8NCN4 708 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 TTC17Q96AE7 1141 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 ATG4CQ96DT6 458 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 RPS6KC1Q96S38 1066 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 IDI2Q9BXS1 227 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 PHKA2P46019 1235 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 RBM15Q96T37 977 aaKnown RBP eCLIP14.75□□□□□ -0.052e-6■■□□□ 12.2
CNOT3-210ENST00000618939 KLC4Q9NSK0 619 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 PCDHGC5Q9Y5F6 944 aa14.75□□□□□ -0.05
CNOT3-210ENST00000618939 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 DDX3XO00571 662 aaKnown RBP eCLIP14.74□□□□□ -0.058e-8■■■■□ 25.8
CNOT3-210ENST00000618939 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 ITGA4P13612 1032 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 CASP5P51878 434 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 TAP1Q03518 808 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 ACTN3Q08043 901 aaPredicted RBP14.74□□□□□ -0.05
CNOT3-210ENST00000618939 MYBPC2Q14324 1141 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 KYNUQ16719 465 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 COBLL1Q53SF7 1204 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 OTOP1Q7RTM1 612 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 PDCD7Q8N8D1 485 aaKnown RBP14.74□□□□□ -0.05
CNOT3-210ENST00000618939 ATP11CQ8NB49 1132 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 MYCBPAPQ8TBZ2 947 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 KLC2Q9H0B6 622 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 TMBIM4Q9HC24 238 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 HEY1Q9Y5J3 304 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 FRMD3A2A2Y4 597 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 M0QYV0 167 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 TXNDC9O14530 226 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 LUC7L3O95232 432 aaKnown RBP14.74□□□□□ -0.05
CNOT3-210ENST00000618939 CDR2Q01850 454 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 ZNF280CQ8ND82 737 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 SLC20A1Q8WUM9 679 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 C18orf8Q96DM3 657 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 MED15Q96RN5 788 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 SENP7Q9BQF6 1050 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 TRIM55Q9BYV6 548 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 VCX3BQ9H321 246 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 BCL9LQ86UU0 1499 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 A0A0G2JND7 137 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 PABPN1LA6NDY0 278 aaKnown RBP14.74□□□□□ -0.05
CNOT3-210ENST00000618939 GZMAP12544 262 aa14.74□□□□□ -0.05
CNOT3-210ENST00000618939 FNTAP49354 379 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms