RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ARNTL2Q8WYA1 636 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 CCDC34Q96HJ3 373 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 TIGD1Q96MW7 591 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 CASD1Q96PB1 797 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 BPIFA3Q9BQP9 254 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PYM1Q9BRP8 204 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 CDT1Q9H211 546 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 NXF3Q9H4D5 531 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ST6GALNAC4Q9H4F1 302 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ZHX3Q9H4I2 956 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PRDM12Q9H4Q4 367 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 NSUN3Q9H649 340 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 TMEM134Q9H6X4 195 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 MAGEF1Q9HAY2 307 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 FAM105AQ9NUU6 356 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PRKAG3Q9UGI9 489 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 GIT1Q9Y2X7 761 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 HES2Q9Y543 173 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PCDHB2Q9Y5E7 798 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 IRAK3Q9Y616 596 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 FNDC1Q4ZHG4 1894 aaPredicted RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 TRIP11Q15643 1979 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 SMTNL1A8MU46 457 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 BECN2A8MW95 431 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 K7ENM7 598 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 K7ERI5 159 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PIGRP01833 764 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 RPN1P04843 607 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 HOXB8P17481 243 aaPredicted RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 BMP6P22004 513 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 IGFBP4P22692 258 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ADSSP30520 456 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ZNF165P49910 485 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 WNT7BP56706 349 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 TUBB4BP68371 445 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 CREMQ03060 361 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 TYRO3Q06418 890 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 GPM6BQ13491 265 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PRPF4BQ13523 1007 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ADGRE1Q14246 886 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 POSTNQ15063 836 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 MAPK6Q16659 721 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 KMT5BQ4FZB7 885 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PAN2Q504Q3 1202 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 SEZ6Q53EL9 994 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 FAM26FQ5R3K3 315 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ATF7IP2Q5U623 682 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PDXDC1Q6P996 788 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 SLC27A1Q6PCB7 646 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 CYP26C1Q6V0L0 522 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 TMEM184AQ6ZMB5 413 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ZBTB33Q86T24 672 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PPFIBP1Q86W92 1011 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 FAM178BQ8IXR5 827 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 CEP57L1Q8IYX8 460 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 RNF169Q8NCN4 708 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 GSTCDQ8NEC7 633 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 SPATA20Q8TB22 786 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 URGCPQ8TCY9 931 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 SCFD1Q8WVM8 642 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PABPC5Q96DU9 382 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 FAM84AQ96KN4 292 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ZFP42Q96MM3 310 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 FAM161BQ96MY7 647 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ASB2Q96Q27 587 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 POP1Q99575 1024 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 ADPGKQ9BRR6 497 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 TMEM175Q9BSA9 504 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 MRPL4Q9BYD3 311 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 RHOBTB2Q9BYZ6 727 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 LRRC27Q9C0I9 530 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 OLFML3Q9NRN5 406 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 MIOSQ9NXC5 875 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 SNTG2Q9NY99 539 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 LARSQ9P2J5 1176 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 CACNG4Q9UBN1 327 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 SEL1LQ9UBV2 794 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 HOOK1Q9UJC3 728 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 TBX20Q9UMR3 447 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PLAGL2Q9UPG8 496 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 TNFSF13BQ9Y275 285 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 IPPQ9Y573 584 aa5.73□□□□□ -1.49
SHMT1-211ENST00000618902 MRPL42Q9Y6G3 142 aaKnown RBP5.73□□□□□ -1.49
SHMT1-211ENST00000618902 PVALEFA0A1B0GWK0 134 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 TBKBP1A7MCY6 615 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 F8W810 466 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 RFXAPO00287 272 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 PTGESO14684 152 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 N4BP3O15049 544 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 TGFB1I1O43294 461 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 LPXNO60711 386 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 KINO60870 393 aaKnown RBP5.72□□□□□ -1.49
SHMT1-211ENST00000618902 ALDH2P05091 517 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 AKAP5P24588 427 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 CTNNB1P35222 781 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 PBX3P40426 434 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 MCL1Q07820 350 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 NAB2Q15742 525 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms