RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 BCL7CQ8WUZ0 217 aaPredicted RBP4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 HNRNPLLQ8WVV9 542 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 PEX13Q92968 403 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 FAM20AQ96MK3 541 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 EIF3CQ99613 913 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 NTMT1Q9BV86 223 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 NAA15Q9BXJ9 866 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 USP26Q9BXU7 913 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 ACPTQ9BZG2 426 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 KCNH6Q9H252 994 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 HAUS4Q9H6D7 363 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 MVB12BQ9H7P6 319 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 UBN1Q9NPG3 1134 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 NSMCE4AQ9NXX6 385 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 AMACRQ9UHK6 382 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 PAIP2BQ9ULR5 123 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 MED16Q9Y2X0 877 aa4.4□□□□□ -1.71
UBE2D3-233ENST00000618836 KIF28PB7ZC32 967 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PSMD9O00233 223 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 POLR2DO15514 142 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 EGFRP00533 1210 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PLGP00747 810 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PNMA6AP0CW24 399 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 GPTP24298 496 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 KCNJ6P48051 423 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 AMPHP49418 695 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 TKTL1P51854 596 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 LBX1P52954 281 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 CDC16Q13042 620 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 GPS2Q13227 327 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ERCC6LQ2NKX8 1250 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PLA2G2CQ5R387 149 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 KANK2Q63ZY3 851 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ITPRIPL1Q6GPH6 555 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 OGFOD3Q6PK18 319 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ZNF704Q6ZNC4 412 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ARHGAP36Q6ZRI8 547 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 KDELC2Q7Z4H8 507 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ERO1BQ86YB8 467 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 TOR1AIP2Q8NFQ8 470 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 NSUN6Q8TEA1 469 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 AIDAQ96BJ3 306 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 NT5C1BQ96P26 610 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 HNRNPABQ99729 332 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SCPEP1Q9HB40 452 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 BATF3Q9NR55 127 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 RTEL1Q9NZ71 1219 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SALL4Q9UJQ4 1053 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 BAG5Q9UL15 447 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 GPR34Q9UPC5 381 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ATP6V1DQ9Y5K8 247 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ZFP37Q9Y6Q3 630 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 A0A1B0GWJ7 208 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PMM2O15305 246 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 RIPK2O43353 540 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 CLN5O75503 358 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 CHRNA1P02708 482 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ADRB2P07550 413 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 RETP07949 1114 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 POLR2MP0CAP2 368 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SYN1P17600 705 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PSMC4P43686 418 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SSTP61278 116 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 POLR2GP62487 172 aaKnown RBP eCLIP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 C19orf57Q0VDD7 668 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SEPT6Q14141 434 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 FAM209AQ5JX71 171 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 TBCELQ5QJ74 424 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 KLC3Q6P597 504 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 LRSAM1Q6UWE0 723 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 P3H2Q8IVL5 708 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 TTLL11Q8NHH1 800 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 DEPTORQ8TB45 409 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 CACTINQ8WUQ7 758 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 RUFY2Q8WXA3 655 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 HDAC11Q96DB2 347 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 TRERF1Q96PN7 1200 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PIGSQ96S52 555 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SECISBP2Q96T21 854 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 GORASP1Q9BQQ3 440 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 TTLL2Q9BWV7 592 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 TRIM55Q9BYV6 548 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 PRDM5Q9NQX1 630 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 FAM153AQ9UHL3 310 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 NOD1Q9Y239 953 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 DNMT3AQ9Y6K1 912 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 E9PCH4 1651 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 ABCC11Q96J66 1382 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 SH3TC1Q8TE82 1336 aa4.39□□□□□ -1.71
UBE2D3-233ENST00000618836 A0A1B0GUA9 196 aa4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 ZSCAN5CA6NGD5 496 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 E9PMD0 336 aa4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 STX16-NPEPL1H3BU86 382 aa4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 NPC1O15118 1278 aa4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 MTSS1O43312 755 aa4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 RANBP6O60518 1105 aaKnown RBP4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 SIN3BO75182 1162 aa4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 NAGAP17050 411 aa4.38□□□□□ -1.71
UBE2D3-233ENST00000618836 CTRB1P17538 263 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms