RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SAAL1Q96ER3 474 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 SNF8Q96H20 258 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 ATP6V0A4Q9HBG4 840 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 KCNK9Q9NPC2 374 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 KCNH7Q9NS40 1196 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.8■■□□□ 1.08
NEK3-208ENST00000618534 ITIH2P19823 946 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 IVDP26440 423 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 ITGA8P53708 1063 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 PEX3P56589 373 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 SNRNP35Q16560 246 aaKnown RBP21.8■■□□□ 1.08
NEK3-208ENST00000618534 KYNUQ16719 465 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 TRMT1LQ7Z2T5 733 aaKnown RBP21.8■■□□□ 1.08
NEK3-208ENST00000618534 LDHDQ86WU2 507 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 IL31RAQ8NI17 732 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 GDAP1Q8TB36 358 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 DDX1Q92499 740 aaKnown RBP21.8■■□□□ 1.08
NEK3-208ENST00000618534 PRMT6Q96LA8 375 aaPredicted RBP21.8■■□□□ 1.08
NEK3-208ENST00000618534 TRIM7Q9C029 511 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 TOPORSQ9NS56 1045 aaPredicted RBP21.8■■□□□ 1.08
NEK3-208ENST00000618534 ANAPC7Q9UJX3 599 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 TTC4O95801 387 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 GH1P01241 217 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 MPP2Q14168 576 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 ACCSLQ4AC99 568 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 ACAD10Q6JQN1 1059 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 PWWP2AQ96N64 755 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 ECT2Q9H8V3 914 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 FBXO28Q9NVF7 368 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 GRIN3BO60391 1043 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 SUN1O94901 812 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 RIPK1Q13546 671 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 PTK6Q13882 451 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 GALNTL6Q49A17 601 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 SLC27A3Q5K4L6 730 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 KRT39Q6A163 491 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 CHURC1Q8WUH1 139 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 PLVAPQ9BX97 442 aa21.79■■□□□ 1.08
NEK3-208ENST00000618534 DHX15O43143 795 aaKnown RBP21.78■■□□□ 1.08
NEK3-208ENST00000618534 NQO1P15559 274 aaKnown RBP21.78■■□□□ 1.08
NEK3-208ENST00000618534 ATP5DP30049 168 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 ADSSP30520 456 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 MAPK4P31152 587 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 SPP2Q13103 211 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 ZKSCAN8Q15776 578 aaPredicted RBP21.78■■□□□ 1.08
NEK3-208ENST00000618534 ZNF622Q969S3 477 aaKnown RBP eCLIP21.78■■□□□ 1.08
NEK3-208ENST00000618534 GJD4Q96KN9 370 aaPredicted RBP21.78■■□□□ 1.08
NEK3-208ENST00000618534 COL20A1Q9P218 1284 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 VPS41P49754 854 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 TLDC1Q6P9B6 456 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 TAS1R2Q8TE23 839 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 CKAP2Q8WWK9 683 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 STAMBPL1Q96FJ0 436 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 MASTLQ96GX5 879 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 NT5C1BQ96P26 610 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 VEZTQ9HBM0 779 aa21.78■■□□□ 1.08
NEK3-208ENST00000618534 THAP12O43422 761 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 BRAFP15056 766 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 CLEC16AQ2KHT3 1053 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 CRELD2Q6UXH1 353 aaPredicted RBP21.77■■□□□ 1.08
NEK3-208ENST00000618534 PHLDB2Q86SQ0 1253 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 CYP4X1Q8N118 509 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 PARD3BQ8TEW8 1205 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 ST6GALNAC4Q9H4F1 302 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 NINJ2Q9NZG7 142 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 R3HDM2Q9Y2K5 976 aaKnown RBP21.77■■□□□ 1.08
NEK3-208ENST00000618534 IGF2BP3O00425 579 aaKnown RBP eCLIP21.77■■□□□ 1.08
NEK3-208ENST00000618534 ATF2P15336 505 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 QARSP47897 775 aaKnown RBP21.77■■□□□ 1.08
NEK3-208ENST00000618534 ALDH5A1P51649 535 aaPredicted RBP21.77■■□□□ 1.08
NEK3-208ENST00000618534 GPC3P51654 580 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 ZNF268Q14587 947 aaPredicted RBP21.77■■□□□ 1.08
NEK3-208ENST00000618534 UGCGQ16739 394 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 CC2D2BQ6DHV5 1058 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 SPATA21Q7Z572 469 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 KIFC3Q9BVG8 833 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 DCLK3Q9C098 648 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 TMEM8AQ9HCN3 771 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
NEK3-208ENST00000618534 HERC5Q9UII4 1024 aaKnown RBP21.77■■□□□ 1.08
NEK3-208ENST00000618534 COQ4Q9Y3A0 265 aa21.77■■□□□ 1.08
NEK3-208ENST00000618534 TCP10L2B9ZVM9 353 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 CETPP11597 493 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 YWHABP31946 246 aaKnown RBP21.76■■□□□ 1.07
NEK3-208ENST00000618534 NCKAP1LP55160 1127 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 SEPT14Q6ZU15 432 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 KIFAP3Q92845 792 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 TBK1Q9UHD2 729 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 PNMA3Q9UL41 463 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 TOM1O60784 492 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 RPSAP08865 295 aaKnown RBP21.76■■□□□ 1.07
NEK3-208ENST00000618534 KRT5P13647 590 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 PDE6BP35913 854 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 BNIP1Q12981 228 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 TNIP1Q15025 636 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 DAB2IPQ5VWQ8 1189 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 C7orf43Q8WVR3 580 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 AGBL1Q96MI9 1066 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 ANAPC5Q9UJX4 755 aa21.76■■□□□ 1.07
NEK3-208ENST00000618534 ARL2BPQ9Y2Y0 163 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms