RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 GLYCTKQ8IVS8 523 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 SPIRE2Q8WWL2 714 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 RIN2Q8WYP3 895 aaPredicted RBP24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 INTS4Q96HW7 963 aaKnown RBP24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 NECTIN4Q96NY8 510 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 CCDC94Q9BW85 323 aaPredicted RBP24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 SFXN1Q9H9B4 322 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 PTPRHQ9HD43 1115 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 CHST7Q9NS84 486 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 KCND2Q9NZV8 630 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 MYH11P35749 1972 aa24.21■■□□□ 1.47
SYNGR3-206ENST00000618464 SF3B1O75533 1304 aaKnown RBP eCLIP24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 GRM5P41594 1212 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 SMTNP53814 917 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 SIGLEC14Q08ET2 396 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 MCM6Q14566 821 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 PTPN21Q16825 1174 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 TMEM161BQ8NDZ6 487 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 ASIC4Q96FT7 647 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 ZBTB45Q96K62 511 aaPredicted RBP24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 NTPCRQ9BSD7 190 aaKnown RBP24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 RXFP1Q9HBX9 757 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 MAN1C1Q9NR34 630 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 BLOC1S4Q9NUP1 217 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 ANKFY1Q9P2R3 1169 aa24.2■■□□□ 1.46
SYNGR3-206ENST00000618464 PLXNA3P51805 1871 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 MAPTP10636 758 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 RPL17P18621 184 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 MRE11P49959 708 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 YARSP54577 528 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 PTPAQ15257 358 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 ATAT1Q5SQI0 421 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 PRSS55Q6UWB4 352 aaPredicted RBP24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 MPZL3Q6UWV2 235 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 PRSS33Q8NF86 280 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 RAD54LQ92698 747 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 REEP2Q9BRK0 252 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 MTMR6Q9Y217 621 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 NR2E1Q9Y466 385 aa24.19■■□□□ 1.46
SYNGR3-206ENST00000618464 GLUD1P00367 558 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 SPATA31D3P0C874 917 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 MCF2P10911 925 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 PROZP22891 400 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 RTP2Q5QGT7 225 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 FAM171A1Q5VUB5 890 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 SPATA31D4Q6ZUB0 917 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 USP49Q70CQ1 688 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 CEP57Q86XR8 500 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 PALB2Q86YC2 1186 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 FBXL6Q8N531 539 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 EPSTI1Q96J88 318 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 PPP1R10Q96QC0 940 aaKnown RBP24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 GOLGA2P5Q9HBQ8 144 aa24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 LARSQ9P2J5 1176 aaKnown RBP24.18■■□□□ 1.46
SYNGR3-206ENST00000618464 C2CD4DB7Z1M9 353 aa24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 ABLIM1O14639 778 aa24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 FAM13AO94988 1023 aa24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 KRT18P05783 430 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 IGFBP6P24592 240 aaPredicted RBP24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 SUGP1Q8IWZ8 645 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 ACAP3Q96P50 834 aa24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 ZHX3Q9H4I2 956 aa24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 TOPORSQ9NS56 1045 aaPredicted RBP24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 KCNG1Q9UIX4 513 aa24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 FBXO2Q9UK22 296 aaPredicted RBP24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 ODF2LQ9ULJ1 636 aa24.17■■□□□ 1.46
SYNGR3-206ENST00000618464 TRIP11Q15643 1979 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 SMIM28A0A1B0GU29 152 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 MATR3P43243 847 aaKnown RBP eCLIP24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 CLCNKBP51801 687 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 SEZ6Q53EL9 994 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 GPR149Q86SP6 731 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 MYCT1Q8N699 235 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 BICD1Q96G01 975 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 SNX27Q96L92 541 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 CLIC6Q96NY7 704 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 TTPALQ9BTX7 342 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 CCSER1Q9C0I3 900 aa24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 DAXXQ9UER7 740 aaPredicted RBP24.16■■□□□ 1.46
SYNGR3-206ENST00000618464 STX6O43752 255 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 TOM1L1O75674 476 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 B3GAT3O94766 335 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 BRD1O95696 1058 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 NCKAP1LP55160 1127 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 NOLC1Q14978 699 aaKnown RBP eCLIP24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 HAUS6Q7Z4H7 955 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 KREMEN2Q8NCW0 462 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 LARP4BQ92615 738 aaKnown RBP24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 PHOX2BQ99453 314 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 FNIP2Q9P278 1114 aa24.15■■□□□ 1.46
SYNGR3-206ENST00000618464 K7ENM7 598 aa24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 TGM5O43548 720 aa24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 RFPL2O75678 378 aa24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 VCPP55072 806 aaKnown RBP24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 CREMQ03060 361 aa24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 SOX4Q06945 474 aaPredicted RBP24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 XKR4Q5GH76 650 aa24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 ELMSAN1Q6PJG2 1045 aa24.14■■□□□ 1.45
SYNGR3-206ENST00000618464 ALKAL1Q6UXT8 129 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms