RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 C1orf228Q6PIY5 440 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 NEK10Q6ZWH5 1172 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 SYTL1Q8IYJ3 562 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 JADE3Q92613 823 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 EZH1Q92800 747 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 MAGEB5Q9BZ81 275 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ZWILCHQ9H900 591 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 GAP43P17677 238 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 CEP72Q9P209 647 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 CORO1CQ9ULV4 474 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 O00370 1275 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 TSPAN4O14817 238 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 WDR36Q8NI36 951 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 HSPH1Q92598 858 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 MAD2L2Q9UI95 211 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 SNTNA6NMZ2 147 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 POLR2EP19388 210 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ABATP80404 500 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 LBRQ14739 615 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 NR1D2Q14995 579 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ARL13BQ3SXY8 428 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 PREPLQ4J6C6 727 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 KLHL32Q96NJ5 620 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 PSMA2P25787 234 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 QARSP47897 775 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 RIN2Q8WYP3 895 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 DDX17Q92841 729 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ROPN1BQ9BZX4 212 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ROPN1Q9HAT0 212 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 MARCOQ9UEW3 520 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 KIF1BO60333 1816 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 CSE1LP55060 971 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 C16orf62Q7Z3J2 963 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ING4Q9UNL4 249 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 GINS2Q9Y248 185 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 DISP3Q9P2K9 1392 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 RNF123Q5XPI4 1314 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ARPC4-TTLL3A0A0A6YYG9 625 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ATP5JP18859 108 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 GFPT1Q06210 699 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 SNX12Q9UMY4 172 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 IVNS1ABPQ9Y6Y0 642 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF806P0C7X5 589 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 MLXQ9UH92 298 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 DBR1Q9UK59 544 aaKnown RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 BAIAP2Q9UQB8 552 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 STARP49675 285 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 USH1GQ495M9 461 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 RMND5BQ96G75 393 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-208ENST00000618395 NLRP3Q96P20 1036 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 MANSC1Q9H8J5 431 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 TMCO1Q9UM00 188 aa15.78■□□□□ 0.12
COL5A1-208ENST00000618395 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-208ENST00000618395 MYCLP12524 364 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF284Q2VY69 593 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 PACSIN1Q9BY11 444 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 SLC1A4P43007 532 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 SESN2P58004 480 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-208ENST00000618395 USF2Q15853 346 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-208ENST00000618395 ZSWIM7Q19AV6 140 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 FAM43BQ6ZT52 329 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-208ENST00000618395 MYRFQ9Y2G1 1151 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 MYH3P11055 1940 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 BTBD18B2RXH4 712 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 F8W031 263 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-208ENST00000618395 MSL3P1P0C860 447 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 HSMCR30P0CW71 290 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 CCDC36Q8IYA8 594 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 ANO3Q9BYT9 981 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 HSPBP1Q9NZL4 362 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 AMACRQ9UHK6 382 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 ATPIF1Q9UII2 106 aa15.77■□□□□ 0.12
COL5A1-208ENST00000618395 SPDYE5A6NIY4 337 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 TRAF3Q13114 568 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 THEMIS2Q5TEJ8 643 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 PLGRKTQ9HBL7 147 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 TRIM43BA6NCK2 446 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 LGALS16A8MUM7 142 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 NUDT2P50583 147 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 TTC27Q6P3X3 843 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 RHPN2Q8IUC4 686 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 ARMT1Q9H993 441 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 RSL24D1Q9UHA3 163 aaKnown RBP15.77■□□□□ 0.11
COL5A1-208ENST00000618395 SYNDIG1LA6NDD5 238 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 GPC5P78333 572 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 NAALADL2Q58DX5 795 aa15.77■□□□□ 0.11
COL5A1-208ENST00000618395 KIAA1024Q9UPX6 916 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 KANSL1LA0AUZ9 987 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 PHGDHO43175 533 aaKnown RBP15.76■□□□□ 0.11
COL5A1-208ENST00000618395 FLT3P36888 993 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 TNFAIP2Q03169 654 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 ZBTB8OSQ8IWT0 167 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 GIPC3Q8TF64 312 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 ZIM3Q96PE6 472 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 ING3Q9NXR8 418 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 NEMP1O14524 444 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms