RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 CXCL10P02778 98 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 CXCL8P10145 99 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 DLATP10515 647 aaKnown RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 TNNI1P19237 187 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 ITGB8P26012 769 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 CDC25BP30305 580 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 FMO5P49326 533 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 PPP3CAQ08209 521 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 KCNMA1Q12791 1236 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 PTPN21Q16825 1174 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 SLC10A6Q3KNW5 377 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 CBWD6Q4V339 395 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 CBWD3Q5JTY5 395 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 CBWD5Q5RIA9 395 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 MRPL10Q7Z7H8 261 aaKnown RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 USP37Q86T82 979 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 RTN4RL1Q86UN2 441 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 VSTM4Q8IW00 320 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 DBF4BQ8NFT6 615 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 ZNF516Q92618 1163 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 ANP32BQ92688 251 aaKnown RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 TRIM43Q96BQ3 446 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 FAM212AQ96EL1 285 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 ABHD8Q96I13 439 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 PDLIM2Q96JY6 352 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 ERGIC2Q96RQ1 377 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 FNBP1Q96RU3 617 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 CGRRF1Q99675 332 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 ADAM2Q99965 735 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 CCDC94Q9BW85 323 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 FTHL17Q9BXU8 183 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 NXF3Q9H4D5 531 aaKnown RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 MMRN2Q9H8L6 949 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 PDE11AQ9HCR9 933 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 RGS18Q9NS28 235 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 TOPORSQ9NS56 1045 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-219ENST00000617757 HES2Q9Y543 173 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 PCDHB2Q9Y5E7 798 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 PTPRJQ12913 1337 aa8.75□□□□□ -1.01
TARDBP-219ENST00000617757 A0A0U1RQF3 1178 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 A0A1W2PQC6 194 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 TULP1O00294 542 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 PMM2O15305 246 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 STX10O60499 249 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 N4BP1O75113 896 aaKnown RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 RECQL4O94761 1208 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 C4BPAP04003 597 aaKnown RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 AKAP5P24588 427 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 GTF2H1P32780 548 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 RFC2P35250 354 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 GCLMP48507 274 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 RAB27AP51159 221 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 YARSP54577 528 aaKnown RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 SYCP1Q15431 976 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 TCTN1Q2MV58 587 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 FKBP15Q5T1M5 1219 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 LMBRD2Q68DH5 695 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 KRT39Q6A163 491 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 ALKAL1Q6UXT8 129 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 C15orf39Q6ZRI6 1047 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 FAM43BQ6ZT52 329 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 WDR49Q8IV35 697 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 CD302Q8IX05 232 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 EFCAB13Q8IY85 973 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 LINC01599Q8WXQ3 324 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 SEPT8Q92599 483 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 APBB2Q92870 758 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 VWCEQ96DN2 955 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 FAM84AQ96KN4 292 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 APOL6Q9BWW8 343 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 TMEM117Q9H0C3 514 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 CXCL16Q9H2A7 254 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 PLEKHA5Q9HAU0 1116 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 TMEM8AQ9HCN3 771 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 PRDM5Q9NQX1 630 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-219ENST00000617757 PARP2Q9UGN5 583 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 SIK3Q9Y2K2 1263 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 TTC3P53804 2025 aa8.74□□□□□ -1.01
TARDBP-219ENST00000617757 GTPBP10A4D1E9 387 aaKnown RBP8.73□□□□□ -1.01
TARDBP-219ENST00000617757 MEIS3P2A8K0S8 358 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 C9IYK1 514 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 ENPP3O14638 875 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 P4HA2O15460 535 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 SKIP12755 728 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 ITGA4P13612 1032 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 RAG1P15918 1043 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 ATF7P17544 494 aaPredicted RBP8.73□□□□□ -1.01
TARDBP-219ENST00000617757 SLC9A1P19634 815 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 KLK7P49862 253 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 MXI1P50539 228 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 AP3M2P53677 418 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 FAM189BP81408 668 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 MYL7Q01449 175 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 CCDC173Q0VFZ6 552 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 EPC2Q52LR7 807 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 XKR4Q5GH76 650 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 JADE1Q6IE81 842 aa8.73□□□□□ -1.01
TARDBP-219ENST00000617757 MFSD5Q6N075 450 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms