RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 PABPC4LP0CB38 370 aaKnown RBP7.82□□□□□ -1.16
PDE6A-205ENST00000617647 PLS3P13797 630 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 ITGA6P23229 1130 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 RASGRF1Q13972 1273 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 DHX34Q14147 1143 aaKnown RBP7.82□□□□□ -1.16
PDE6A-205ENST00000617647 GALNTL6Q49A17 601 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 FAM83BQ5T0W9 1011 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 IFIT1BQ5T764 474 aaKnown RBP7.82□□□□□ -1.16
PDE6A-205ENST00000617647 FBXO31Q5XUX0 539 aaPredicted RBP7.82□□□□□ -1.16
PDE6A-205ENST00000617647 PCNX4Q63HM2 1172 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 CLVS1Q8IUQ0 354 aaPredicted RBP7.82□□□□□ -1.16
PDE6A-205ENST00000617647 NELFCDQ8IXH7 590 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 TTC17Q96AE7 1141 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 TRABDQ9H4I3 376 aa7.82□□□□□ -1.16
PDE6A-205ENST00000617647 RSL24D1Q9UHA3 163 aaKnown RBP7.82□□□□□ -1.16
PDE6A-205ENST00000617647 CDK12Q9NYV4 1490 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 H0YGN5 161 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF263O14978 683 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CDH16O75309 829 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ZBED1O96006 694 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 KITP10721 976 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 UQCRBP14927 111 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ENDOUP21128 410 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 FECHP22830 423 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 MAP4P27816 1152 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 NCKAP1LP55160 1127 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 RHBDL3P58872 404 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 OTUD4Q01804 1114 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PLOD1Q02809 727 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 IKQ13123 557 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 TRPC3Q13507 836 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 WDR72Q3MJ13 1102 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 DNAL1Q4LDG9 190 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 LPCAT4Q643R3 524 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CCDC137Q6PK04 289 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 APTXQ7Z2E3 356 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SERPINB12Q96P63 405 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 NOL6Q9H6R4 1146 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SLCO1B3Q9NPD5 702 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PCDH12Q9NPG4 1184 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 DDX25Q9UHL0 483 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 NFS1Q9Y697 457 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 WDR17Q8IZU2 1322 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SALL1Q9NSC2 1324 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ATP7BP35670 1465 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 C1orf232A0A0U1RR37 186 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SSU72P8A0A1W2PR75 194 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 GOLGA8IPA6NC78 632 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 UNCXA6NJT0 531 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SYCE1LA8MT33 242 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PTCD1O75127 700 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 FKBP6O75344 327 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PDGFRBP09619 1106 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 MSL3P1P0C860 447 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 KPNA1P52294 538 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 GPSM2P81274 684 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CDC16Q13042 620 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 LRP8Q14114 963 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SLC18A3Q16572 532 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 NADK2Q4G0N4 442 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ANKRD40Q6AI12 368 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 TRMT10CQ7L0Y3 403 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SV2BQ7L1I2 683 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ASRGL1Q7L266 308 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 GPR141Q7Z602 305 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PASD1Q8IV76 773 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 GATA6Q92908 595 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 RPAP3Q9H6T3 665 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 EPS15L1Q9UBC2 864 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 TRPC5Q9UL62 973 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 NEDD4P46934 1319 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 A0A1W2PQJ5 194 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ZBBXA8MT70 800 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 GSC2O15499 205 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 RIPK2O43353 540 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 FAM58BPP0C7Q3 252 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CYP2C9P11712 490 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CCDC130P13994 396 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ECE1P42892 770 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 TRPC1P48995 793 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CASP5P51878 434 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF200P98182 395 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CDK17Q00537 523 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ADRM1Q16186 407 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CTC1Q2NKJ3 1217 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 HP1BP3Q5SSJ5 553 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 DUS1LQ6P1R4 473 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 FASTKD5Q7L8L6 764 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF572Q7Z3I7 529 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 RSPH3Q86UC2 560 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CATSPER3Q86XQ3 398 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 POU5F2Q8N7G0 328 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ACTRT1Q8TDG2 376 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 INPP4AQ96PE3 977 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 HAPLN3Q96S86 360 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CADM1Q9BY67 442 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms