RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 CTSHP09668 335 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 PNMA6AP0CW24 399 aaPredicted RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 ITGA4P13612 1032 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 GUCY2CP25092 1073 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 MRPS25P82663 173 aaKnown RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 TTC19Q6DKK2 380 aaPredicted RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 RAD9BQ6WBX8 426 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 SENP7Q9BQF6 1050 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 SMYD2Q9NRG4 433 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 RSPH10B2B2RC85 870 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 CREB3O43889 395 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 RSPH10BP0C881 870 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 PAMP19021 973 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 ROR1Q01973 937 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 SV2CQ496J9 727 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 CC2D1AQ6P1N0 951 aaPredicted RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 CCDC137Q6PK04 289 aaKnown RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 DHX38Q92620 1227 aaKnown RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 PPME1Q9Y570 386 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 TMEM253P0C7T8 217 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 MAGED2Q9UNF1 606 aaPredicted RBP13□□□□□ -0.33
CYFIP1-207ENST00000617556 NALCNQ8IZF0 1738 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 C17orf102A2RUQ5 167 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 NFKBIAP25963 317 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 CDK17Q00537 523 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 GRIK5Q16478 980 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 GNASQ5JWF2 1037 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 TTI2Q6NXR4 508 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 RCOR2Q8IZ40 523 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 NUDCD1Q96RS6 583 aa13□□□□□ -0.33
CYFIP1-207ENST00000617556 KRT37O76014 449 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 LCP1P13796 627 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 CPB1P15086 417 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 GARTP22102 1010 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 GTF2H1P32780 548 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 KLK7P49862 253 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 TMEM62Q0P6H9 643 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 BTBD8Q5XKL5 378 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 HEATR6Q6AI08 1181 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 SPATA4Q8NEY3 305 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 SNF8Q96H20 258 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 DHX35Q9H5Z1 703 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 EFCC1Q9HA90 598 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 HERVK_113P62684 666 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 MAP3K21Q5TCX8 1036 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 CPA5Q8WXQ8 436 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 KIFC3Q9BVG8 833 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 DNAJC17Q9NVM6 304 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 KRT14P02533 472 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 APOEP02649 317 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 PGK2P07205 417 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 TGFB3P10600 412 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 SSTR3P32745 418 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 CDH6P55285 790 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 NR1H3Q13133 447 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 NME3Q13232 169 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 NDUFAF2Q8N183 169 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 AFG1LQ8WV93 481 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 NT5C1AQ9BXI3 368 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 RANBP17Q9H2T7 1088 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 INTUQ9ULD6 942 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 TACC3Q9Y6A5 838 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 NPTX2P47972 431 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 ADCY1Q08828 1119 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 EARS2Q5JPH6 523 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 METTL7BQ6UX53 244 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 SLC30A5Q8TAD4 765 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 SKA2Q8WVK7 121 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 NKRFO15226 690 aaKnown RBP eCLIP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 PPARGP37231 505 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 PMS2P54278 862 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 MYBPC2Q14324 1141 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 PIGHQ14442 188 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 KLHL38Q2WGJ6 581 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 SYDE1Q6ZW31 735 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 SPATA2LQ8IUW3 424 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-207ENST00000617556 OGTO15294 1046 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 CSPG5O95196 566 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 RALAP11233 206 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 NLRP11P59045 1033 aaKnown RBP12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 ITPRIPL1Q6GPH6 555 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 SLC5A5Q92911 643 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 HDAC11Q96DB2 347 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 MED15Q96RN5 788 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 VCXQ9H320 206 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 OLFML3Q9NRN5 406 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 APOL1O14791 398 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 CYTH3O43739 400 aa12.98□□□□□ -0.33
CYFIP1-207ENST00000617556 PNPLA4P41247 253 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms