RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 MTMR4Q9NYA4 1195 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 NKIRAS1Q9NYS0 192 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 WRAP73Q9P2S5 460 aaPredicted RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 PCYOX1Q9UHG3 505 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 TMEM150BA6NC51 233 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 CALUO43852 315 aaPredicted RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 FESP07332 822 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 ATP6V1C1P21283 382 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 GBP1P32455 592 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 PIK3CAP42336 1068 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 CCDC6Q16204 474 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 PARP10Q53GL7 1025 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 C16orf86Q6ZW13 317 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 UBL4BQ8N7F7 174 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 NCANO14594 1321 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 DDX39AO00148 427 aaKnown RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 TBX10O75333 385 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 TBCAO75347 108 aaKnown RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 USP1O94782 785 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 IVDP26440 423 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 CNGA1P29973 690 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 POLGP54098 1239 aaPredicted RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 NOP14P78316 857 aaKnown RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 LAMB3Q13751 1172 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 ATP13A4Q4VNC1 1196 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 ACSBG2Q5FVE4 666 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 SNX30Q5VWJ9 437 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 CYTH2Q99418 400 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 MOV10L1Q9BXT6 1211 aaKnown RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 ANO3Q9BYT9 981 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 TYW1Q9NV66 732 aaKnown RBP10.09□□□□□ -0.79
MCM3-207ENST00000616552 APEX2Q9UBZ4 518 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 PASKQ96RG2 1323 aa10.09□□□□□ -0.79
MCM3-207ENST00000616552 DNAH12Q6ZR08 3092 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 PI4K2BG5E9Z4 385 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 PDXKO00764 312 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 EXOC3O60645 756 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 CYP1A1P04798 512 aaPredicted RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 BMP3P12645 472 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 KRT15P19012 456 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 SSR1P43307 286 aaKnown RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 SERPINB4P48594 390 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 CLK2P49760 499 aaKnown RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 SCNN1BP51168 640 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 NPEPPSP55786 919 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 MYL7Q01449 175 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ICA1Q05084 483 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 KLC1Q07866 573 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 TBC1D25Q3MII6 688 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 KAZNQ674X7 775 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 MFSD5Q6N075 450 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 PPP1R18Q6NYC8 613 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 EMSYQ7Z589 1322 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ANKMY2Q8IV38 441 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ZC3H3Q8IXZ2 948 aaKnown RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 PPM1KQ8N3J5 372 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ZNF564Q8TBZ8 553 aaPredicted RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 CADM1Q9BY67 442 aaKnown RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 LRRC27Q9C0I9 530 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 DDX4Q9NQI0 724 aaKnown RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 ARL8BQ9NVJ2 186 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 LNPEPQ9UIQ6 1025 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 PCDHAC2Q9Y5I4 1007 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 SYNGAP1Q96PV0 1343 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 PITPNM2Q9BZ72 1349 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ANKRD33BA6NCL7 494 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 PODXLO00592 558 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 CAPN9O14815 690 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 RNF8O76064 485 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 BAG3O95817 575 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ALAS1P13196 640 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 CALRP27797 417 aaKnown RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 GCAP28676 217 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 SETDB1Q15047 1291 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 MAPK6Q16659 721 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 QRICH1Q2TAL8 776 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ZNF568Q3ZCX4 644 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 OR52E8Q6IFG1 317 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 SCYL3Q8IZE3 742 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ZNF653Q96CK0 615 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 MAGEB18Q96M61 343 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 NAP1L3Q99457 506 aaPredicted RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 LZTS2Q9BRK4 669 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 ANAPC5Q9UJX4 755 aa10.08□□□□□ -0.8
MCM3-207ENST00000616552 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.08□□□□□ -0.8
MCM3-207ENST00000616552 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 NVLO15381 856 aaKnown RBP10.07□□□□□ -0.8
MCM3-207ENST00000616552 TTLL1O95922 423 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 CA4P22748 312 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 AMPD1P23109 780 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 DRG2P55039 364 aaKnown RBP10.07□□□□□ -0.8
MCM3-207ENST00000616552 RINT1Q6NUQ1 792 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 OTOAQ7RTW8 1153 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 NBPF5PQ86XG9 351 aaPredicted RBP10.07□□□□□ -0.8
MCM3-207ENST00000616552 PLEKHO2Q8TD55 490 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 LRRC8CQ8TDW0 803 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
MCM3-207ENST00000616552 CCDC127Q96BQ5 260 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms