RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 MTO1Q9Y2Z2 717 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 ALG6Q9Y672 507 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 UCHL3P15374 230 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 FUT4P22083 530 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 PMLP29590 882 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 NEK3P51956 506 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 PTENP60484 403 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 TFAP4Q01664 338 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 TMC5Q6UXY8 1006 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 OR6Y1Q8NGX8 325 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 TLCD1Q96CP7 247 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 MANSC1Q9H8J5 431 aa14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 HBS1LQ9Y450 684 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-205ENST00000616288 POTEMA6NI47 508 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 TBX10O75333 385 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 KRT38O76015 456 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 FTLP02792 175 aaPredicted RBP14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 CHN2P52757 468 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 RASA2Q15283 850 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 CENPUQ71F23 418 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 ARID3BQ8IVW6 561 aaPredicted RBP14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 EME1Q96AY2 570 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 KAZALD1Q96I82 304 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 EPS15L1Q9UBC2 864 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.11
PPP4R3B-205ENST00000616288 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 ESRRBO95718 433 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 GYS1P13807 737 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 MCAMP43121 646 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 C21orf59P57076 290 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 ATG16L1Q676U5 607 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 NLRP10Q86W26 655 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 DDI1Q8WTU0 396 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 ATP2A3Q93084 1043 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 WWP1Q9H0M0 922 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 TRNAU1APQ9NX07 287 aaKnown RBP14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 RTCBQ9Y3I0 505 aaKnown RBP14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 MAGEB3O15480 346 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 DDHD2O94830 711 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 SRGAP2BP0DMP2 458 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 PDIA2Q13087 525 aaKnown RBP14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 TBCKQ8TEA7 893 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 TSNARE1Q96NA8 513 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 TMEM120AQ9BXJ8 343 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 ZNF287Q9HBT7 754 aa14.33□□□□□ -0.12
PPP4R3B-205ENST00000616288 ASLP04424 464 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 NEK2P51955 445 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 MTMR2Q13614 643 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 CIDEBQ9UHD4 219 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 PALLDQ8WX93 1383 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 NBPF26B4DH59 902 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 PEX1O43933 1283 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 LMNB2Q03252 620 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 TMEM53Q6P2H8 277 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 IFNL2Q8IZJ0 200 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 NBPF15Q8N660 670 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 SERPINI1Q99574 410 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 COQ7Q99807 217 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 ZC4H2Q9NQZ6 224 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 DKK3Q9UBP4 350 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 KIF1BO60333 1816 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 NUDT17P0C025 328 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 COILP38432 576 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 LPIN1Q14693 890 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 ACSBG2Q5FVE4 666 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 CASC4Q6P4E1 433 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 RNF169Q8NCN4 708 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 DNM3Q9UQ16 869 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 PRELID1Q9Y255 219 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 MEI4A8MW99 385 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 CBFA2T3O75081 653 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 ITIH2P19823 946 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 PABPC4Q13310 644 aaKnown RBP eCLIP14.32□□□□□ -0.127e-7■■□□□ 13.3
PPP4R3B-205ENST00000616288 DRAP1Q14919 205 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 EMC10Q5UCC4 262 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 TTBK2Q6IQ55 1244 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 ZNF571Q7Z3V5 609 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 CLVS1Q8IUQ0 354 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 FAM186BQ8IYM0 893 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 SPATA20Q8TB22 786 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 SEMA6BQ9H3T3 888 aa14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 ARIH1Q9Y4X5 557 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-205ENST00000616288 A8MXQ7 604 aa14.31□□□□□ -0.12
PPP4R3B-205ENST00000616288 FCHO1O14526 889 aa14.31□□□□□ -0.12
PPP4R3B-205ENST00000616288 POTEIP0CG38 1075 aa14.31□□□□□ -0.12
PPP4R3B-205ENST00000616288 HIRAP54198 1017 aaPredicted RBP14.31□□□□□ -0.12
PPP4R3B-205ENST00000616288 HPCAP84074 193 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms