RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 IQCDQ96DY2 449 aa25.39■■□□□ 1.65
CCND3-223ENST00000616010 CITO14578 2027 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 GPR182O15218 404 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 NOL4O94818 638 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 CD52P31358 61 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 PAK2Q13177 524 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 EPC2Q52LR7 807 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 SLC39A5Q6ZMH5 540 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 CCDC51Q96ER9 411 aa25.38■■□□□ 1.65
CCND3-223ENST00000616010 INTS2Q9H0H0 1204 aaKnown RBP25.38■■□□□ 1.65
CCND3-223ENST00000616010 NXF3Q9H4D5 531 aaKnown RBP25.38■■□□□ 1.65
CCND3-223ENST00000616010 LUC7L2Q9Y383 392 aaKnown RBP25.38■■□□□ 1.65
CCND3-223ENST00000616010 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.38■■□□□ 1.654e-13■□□□□ 9.8
CCND3-223ENST00000616010 KIAA0100Q14667 2235 aaKnown RBP25.38■■□□□ 1.65
CCND3-223ENST00000616010 A0A1W2PQJ5 194 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 PMM2O15305 246 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 KRT9P35527 623 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 SURF1Q15526 300 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 UBXN11Q5T124 520 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 TRAF7Q6Q0C0 670 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 WDR49Q8IV35 697 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 ACAP3Q96P50 834 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 CCDC94Q9BW85 323 aaPredicted RBP25.37■■□□□ 1.65
CCND3-223ENST00000616010 GANQ9H2C0 597 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 PLCB1Q9NQ66 1216 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 PADI3Q9ULW8 664 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 HES2Q9Y543 173 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 MEFVO15553 781 aaPredicted RBP25.37■■□□□ 1.65
CCND3-223ENST00000616010 IL18RAPO95256 599 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 COL6A1P12109 1028 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 DPY19L2P1Q6NXN4 242 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 ANKLE1Q8NAG6 615 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 OR5B17Q8NGF7 314 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 ERVK-5Q9HDB9 667 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 SIX2Q9NPC8 291 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 SNTG2Q9NY99 539 aa25.37■■□□□ 1.65
CCND3-223ENST00000616010 RALGAPA2Q2PPJ7 1873 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 POLR2FP61218 127 aaKnown RBP25.36■■□□□ 1.65
CCND3-223ENST00000616010 BIRC3Q13489 604 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 TDRD10Q5VZ19 366 aaKnown RBP25.36■■□□□ 1.65
CCND3-223ENST00000616010 C15orf39Q6ZRI6 1047 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 CACNA2D4Q7Z3S7 1137 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 LMO3Q8TAP4 145 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 TAS1R2Q8TE23 839 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 NLRC4Q9NPP4 1024 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 ABHD10Q9NUJ1 306 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 CEP72Q9P209 647 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 TLR3O15455 904 aaKnown RBP25.36■■□□□ 1.65
CCND3-223ENST00000616010 LRRN2O75325 713 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 SLC10A6Q3KNW5 377 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 ZACNQ401N2 412 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 KLHDC7AQ5VTJ3 777 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 EFCAB13Q8IY85 973 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 FBXL13Q8NEE6 735 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 MTMR12Q9C0I1 747 aa25.36■■□□□ 1.65
CCND3-223ENST00000616010 LACTBL1A8MY62 500 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 C4BPAP04003 597 aaKnown RBP25.35■■□□□ 1.65
CCND3-223ENST00000616010 POU5F1Q01860 360 aaKnown RBP25.35■■□□□ 1.65
CCND3-223ENST00000616010 BFSP2Q13515 415 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 MBTPS1Q14703 1052 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 TRIM60Q495X7 471 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 LRRC8DQ7L1W4 858 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 ANKRD33Q7Z3H0 272 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 USP38Q8NB14 1042 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 EHBP1Q8NDI1 1231 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 TMEM106CQ9BVX2 250 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 APOL6Q9BWW8 343 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 MCOLN1Q9GZU1 580 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 CHST12Q9NRB3 414 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 COQ4Q9Y3A0 265 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 SQORQ9Y6N5 450 aa25.35■■□□□ 1.65
CCND3-223ENST00000616010 UCHL3P15374 230 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 ZBED6P86452 979 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 TFAMQ00059 246 aaKnown RBP25.34■■□□□ 1.65
CCND3-223ENST00000616010 ZNF397Q8NF99 534 aaPredicted RBP25.34■■□□□ 1.65
CCND3-223ENST00000616010 SEMA4DQ92854 862 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 PANX2Q96RD6 677 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 PRDM10Q9NQV6 1147 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.34■■□□□ 1.653e-8■■■■■ 651.7
CCND3-223ENST00000616010 IPPQ9Y573 584 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 FHOD1Q9Y613 1164 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 NFICP08651 508 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 SELPP16109 830 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 CCZ1BP86790 482 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 CCZ1P86791 482 aaPredicted RBP25.34■■□□□ 1.65
CCND3-223ENST00000616010 GJB7Q6PEY0 223 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 RAB20Q9NX57 234 aa25.34■■□□□ 1.65
CCND3-223ENST00000616010 RECQL4O94761 1208 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 TMEM191BP0C7N4 346 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 ZSCAN20P17040 1043 aaPredicted RBP25.33■■□□□ 1.65
CCND3-223ENST00000616010 PIK3CAP42336 1068 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 AP3M2P53677 418 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 YARSP54577 528 aaKnown RBP25.33■■□□□ 1.65
CCND3-223ENST00000616010 JADE1Q6IE81 842 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 BAP1Q92560 729 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 PAWRQ96IZ0 340 aaKnown RBP25.33■■□□□ 1.65
CCND3-223ENST00000616010 DNAJC7Q99615 494 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 ASB7Q9H672 318 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 APEX2Q9UBZ4 518 aa25.33■■□□□ 1.65
CCND3-223ENST00000616010 AKAP5P24588 427 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms