RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 DRG2P55039 364 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 TTC27Q6P3X3 843 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 KLC3Q6P597 504 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 TRIM59Q8IWR1 403 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 VGLL2Q8N8G2 317 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 KRT35Q92764 455 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 MIPEPQ99797 713 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 GCNT4Q9P109 453 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 STX18Q9P2W9 335 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 TRAF3IP3Q9Y228 551 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 SYNGAP1Q96PV0 1343 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 BTNL10A8MVZ5 291 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 MAGEB3O15480 346 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 GSC2O15499 205 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 EIF4BP23588 611 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 CHKAP35790 457 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 WDR4P57081 412 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 CALCRLQ16602 461 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 MAP7D1Q3KQU3 841 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 MDH1BQ5I0G3 518 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 TRIM67Q6ZTA4 783 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 ARL8BQ9NVJ2 186 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 ZNF212Q9UDV6 495 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 ANAPC5Q9UJX4 755 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 STXBP5LQ9Y2K9 1186 aa11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 DIS3Q9Y2L1 958 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-208ENST00000615468 FLT1P17948 1338 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 TTC4O95801 387 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 DLATP10515 647 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 PRDX5P30044 214 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 PIK3CAP42336 1068 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 NFIXQ14938 502 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 DPY19L2Q6NUT2 758 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 ARHGAP27Q6ZUM4 889 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 NEK8Q86SG6 692 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 HIPK4Q8NE63 616 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 NSL1Q96IY1 281 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 MKNK1Q9BUB5 465 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 LRRC27Q9C0I9 530 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 GANQ9H2C0 597 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 LRRC4BQ9NT99 713 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 NARFQ9UHQ1 456 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 ARFGEF2Q9Y6D5 1785 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 ZBED4O75132 1171 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 KRT17Q04695 432 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 GRB10Q13322 594 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 C1orf146Q5VVC0 180 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 CLNKQ7Z7G1 428 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 SCUBE1Q8IWY4 988 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 TBCKQ8TEA7 893 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 TRABDQ9H4I3 376 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 KRT82Q9NSB4 513 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 EMILIN3Q9NT22 766 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 TRPC5Q9UL62 973 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 SH3GLB1Q9Y371 365 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 NID2Q14112 1375 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 PKD1L3Q7Z443 1732 aa11.02□□□□□ -0.65
TNFAIP3-208ENST00000615468 SMCO2A6NFE2 343 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ARHGAP42A6NI28 874 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 DDX3YO15523 660 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 HARSP12081 509 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ATP6V1B1P15313 513 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 AMPD1P23109 780 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 EVX2Q03828 476 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 SGO2Q562F6 1265 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 SLFN11Q7Z7L1 901 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 LZICQ8WZA0 190 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ARHGEF26Q96DR7 871 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ECSITQ9BQ95 431 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 THAP2Q9H0W7 228 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 BLOC1S4Q9NUP1 217 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 TCRBV7S2A1N4TA0A589 114 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 B2RBV5 119 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 BHMG1C9JSJ3 638 aaPredicted RBP11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 DKC1O60832 514 aaKnown RBP eCLIP11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 HSPA6P17066 643 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 PTGIRP43119 386 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 AP2B1P63010 937 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 CLUL1Q15846 466 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ZNF554Q86TJ5 538 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 STKLD1Q8NE28 680 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 VPS37BQ9H9H4 285 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 STK17AQ9UEE5 414 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ECE2O60344 883 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 DNAJC6O75061 913 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 LRRN2O75325 713 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 GAS8O95995 478 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 ATF2P15336 505 aa11.01□□□□□ -0.65
TNFAIP3-208ENST00000615468 LMNB1P20700 586 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms