RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 XKR3Q5GH77 459 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 FAM160B1Q5W0V3 765 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 IQSEC1Q6DN90 963 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 SMYD5Q6GMV2 418 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 TAPT1Q6NXT6 567 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 VMP1Q96GC9 406 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 PANK4Q9NVE7 773 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 COMMD8Q9NX08 183 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 TIMM22Q9Y584 194 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 COL1A2P08123 1366 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 MYH11P35749 1972 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 SUPT3HO75486 399 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 MYBL1P10243 752 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 CD44P16070 742 aaKnown RBP9.45□□□□□ -0.9
VPS11-206ENST00000614944 RARRES1P49788 294 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 MARSP56192 900 aaKnown RBP9.45□□□□□ -0.9
VPS11-206ENST00000614944 LAMC2Q13753 1193 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 INAQ16352 499 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 ARMCX2Q7L311 632 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 GJA10Q969M2 543 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
VPS11-206ENST00000614944 PURBQ96QR8 312 aaKnown RBP9.45□□□□□ -0.9
VPS11-206ENST00000614944 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 SPOCK3Q9BQ16 436 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 OSBPL1AQ9BXW6 950 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 BLZF1Q9H2G9 400 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 ABHD16BQ9H3Z7 469 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 SAGE1Q9NXZ1 904 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 WRAP73Q9P2S5 460 aaPredicted RBP9.45□□□□□ -0.9
VPS11-206ENST00000614944 LIMA1Q9UHB6 759 aaKnown RBP9.45□□□□□ -0.9
VPS11-206ENST00000614944 SH3GLB1Q9Y371 365 aa9.45□□□□□ -0.9
VPS11-206ENST00000614944 PRPF6O94906 941 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 ANP32DO95626 131 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 PDGFRBP09619 1106 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 ENDOUP21128 410 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 RFC5P40937 340 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 PRCPP42785 496 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 POLE2P56282 527 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 EDRF1Q3B7T1 1238 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 ZCWPW2Q504Y3 356 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 TTI2Q6NXR4 508 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 CEP128Q6ZU80 1094 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 AOPEPQ8N6M6 819 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 KIAA0895Q8NCT3 520 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 SEPT1Q8WYJ6 367 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 PPP1R14BQ96C90 147 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 ZNF653Q96CK0 615 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 MED15Q96RN5 788 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 RABEP2Q9H5N1 569 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 PIDD1Q9HB75 910 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 LRRIQ3A6PVS8 624 aaPredicted RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 TBCAO75347 108 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 NPTXRO95502 500 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 HSPA8P11142 646 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 EEF1GP26641 437 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 YWHABP31946 246 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 RGS2P41220 211 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 KCNJ6P48051 423 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 CCT8P50990 548 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 PSMC6P62333 389 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 SP2Q02086 613 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 MAP7Q14244 749 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 TMEM53Q6P2H8 277 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 RSPH3Q86UC2 560 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 P2RX5Q93086 422 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 APBA2Q99767 749 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 NTPCRQ9BSD7 190 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 ABCB6Q9NP58 842 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 IMPACTQ9P2X3 320 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 GJD2Q9UKL4 321 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 TRAF3IP3Q9Y228 551 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 GSTTP1A0A1W2PQM5 241 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 TBKBP1A7MCY6 615 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 PPP1R37O75864 691 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 CCDC159P0C7I6 412 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 POU5F1Q01860 360 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 ITGA7Q13683 1181 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 TARBP2Q15633 366 aaKnown RBP9.44□□□□□ -0.9
VPS11-206ENST00000614944 CNGA3Q16281 694 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 FAM26FQ5R3K3 315 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 FAM117BQ6P1L5 589 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 C12orf56Q8IXR9 622 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 TEX9Q8N6V9 391 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 PPTC7Q8NI37 304 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 ABHD8Q96I13 439 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 NDNQ99608 321 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 GPR20Q99678 358 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 AASDHPPTQ9NRN7 309 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 DKK3Q9UBP4 350 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 EFR3BQ9Y2G0 817 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 L3MBTL1Q9Y468 752 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 IKBKGQ9Y6K9 419 aa9.44□□□□□ -0.9
VPS11-206ENST00000614944 GOLGA6L10A0A0M3HER8 536 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 A6NNZ2 444 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 H0YCG3 227 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 AARSP49588 968 aaKnown RBP eCLIP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms