RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 NUP93Q8N1F7 819 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 BTBD10Q9BSF8 475 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 LRMDAQ9H2I8 198 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 AGTPBP1Q9UPW5 1226 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 LRRC7Q96NW7 1537 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 GNGT2O14610 69 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ZSCAN9O15535 394 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 FTCDO95954 541 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ITGA2BP08514 1039 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 POLGP54098 1239 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 EGFLAMQ63HQ2 1017 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ADNPQ9H2P0 1102 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CNOT7Q9UIV1 285 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MID2Q9UJV3 735 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ANGEL1Q9UNK9 670 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ABCC6O95255 1503 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TOM1L1O75674 476 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ZNF174Q15697 407 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 DPY19L2Q6NUT2 758 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ACAD11Q709F0 780 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 DIS3LQ8TF46 1054 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TRABDQ9H4I3 376 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 EME2A4GXA9 379 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-213ENST00000613099 BACH1O14867 736 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 NPR1P16066 1061 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 ATF4P18848 351 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-213ENST00000613099 ITGAXP20702 1163 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 COPAP53621 1224 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 SMYD1Q8NB12 490 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 CORO1BQ9BR76 489 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 LMCD1Q9NZU5 365 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM24O15164 1050 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 ZNF846Q147U1 533 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 KIFC2Q96AC6 838 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 GPATCH1Q9BRR8 931 aaKnown RBP5.21□□□□□ -1.57
VPS13D-213ENST00000613099 ALDH8A1Q9H2A2 487 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-213ENST00000613099 MARCH7Q9H992 704 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 EFR3BQ9Y2G0 817 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 NOS1P29475 1434 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 ARHGEF37A1IGU5 675 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 TTLL13PA6NNM8 815 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 FDX1P10109 184 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 GNA11P29992 359 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 PDK3Q15120 406 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 ARHGAP27Q6ZUM4 889 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 GIT1Q9Y2X7 761 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 ATP7BP35670 1465 aa5.21□□□□□ -1.57
VPS13D-213ENST00000613099 GRK2P25098 689 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 EPHB1P54762 984 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TBC1D7Q9P0N9 293 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TAGLN3Q9UI15 199 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ESYT3A0FGR9 886 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SEMA3DO95025 777 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CLK1P49759 484 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 LMBRD2Q68DH5 695 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 RNF43Q68DV7 783 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 APOA5Q6Q788 366 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 C16orf62Q7Z3J2 963 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ESR2Q92731 530 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SNF8Q96H20 258 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CGREF1Q99674 301 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 KRT84Q9NSB2 600 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PALD1Q9ULE6 856 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TCHHQ07283 1943 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 INO80B-WBP1J3KQ70 363 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PHGDHO43175 533 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PHF2O75151 1096 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PYGMP11217 842 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 NLRP11P59045 1033 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ERI1Q8IV48 349 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF555Q8NEP9 628 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TBK1Q9UHD2 729 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ZBTB1Q9Y2K1 713 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TRPC5OSA6NMA1 111 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ANGPT2O15123 496 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 GAS2O43903 313 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TBC1D4O60343 1298 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 KLHL38Q2WGJ6 581 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CMPK2Q5EBM0 449 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ARMC4Q5T2S8 1044 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 NEK8Q86SG6 692 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CCDC8Q9H0W5 538 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 MPP6Q9NZW5 540 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PDS5AQ29RF7 1337 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 IFIT1P09914 478 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 RPL26P61254 145 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CDK17Q00537 523 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PDE4DQ08499 809 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 C5orf22Q49AR2 442 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ERMARDQ5T6L9 678 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SAPCD2Q86UD0 394 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 GPIHBP1Q8IV16 184 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TTC30BQ8N4P2 665 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 RNF38Q9H0F5 515 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SAMSN1Q9NSI8 373 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 LOXHD1Q8IVV2 1947 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 IFNB1P01574 187 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 GAP43P17677 238 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SOX6P35712 828 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms