RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ZACNQ401N2 412 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 TDRD12Q587J7 1177 aaKnown RBP13.31□□□□□ -0.28
CBWD1-220ENST00000612045 CCSAPQ6IQ19 270 aaPredicted RBP13.31□□□□□ -0.28
CBWD1-220ENST00000612045 ARHGEF19Q8IW93 802 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 THNSL1Q8IYQ7 743 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 CEP120Q8N960 986 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 OSMRQ99650 979 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 UBE2TQ9NPD8 197 aaPredicted RBP13.31□□□□□ -0.28
CBWD1-220ENST00000612045 A0A0U1RQJ8 604 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 A0A1B0GUA9 196 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 KIF2AO00139 706 aaPredicted RBP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 AKR1B10O60218 316 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 IPO7O95373 1038 aaKnown RBP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 DARSP14868 501 aaKnown RBP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 FGFR4P22455 802 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 SOX5P35711 763 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 PRMT2P55345 433 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 KLHL30Q0D2K2 578 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 PCBP1Q15365 356 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 SURF1Q15526 300 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 NME8Q8N427 588 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 ATRIPQ8WXE1 791 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 HAUS4Q9H6D7 363 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 BZW2Q9Y6E2 419 aaKnown RBP13.3□□□□□ -0.28
CBWD1-220ENST00000612045 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
CBWD1-220ENST00000612045 ZNF263O14978 683 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 LCA5LO95447 670 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 INHAP05111 366 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 PNMA6AP0CW24 399 aaPredicted RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 EIF4BP23588 611 aaKnown RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 PRKCIP41743 596 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 AP3M2P53677 418 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 OSTNP61366 133 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 SPA17Q15506 151 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 ENOX2Q16206 610 aaKnown RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 ARHGAP44Q17R89 818 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 WDR49Q8IV35 697 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 PCSK9Q8NBP7 692 aaKnown RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 OR5B17Q8NGF7 314 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 FAM212AQ96EL1 285 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 LZTFL1Q9NQ48 299 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 EVI5O60447 810 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 ZC3H11AO75152 810 aaKnown RBP eCLIP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 GFPT2O94808 682 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 HLA-DRAP01903 254 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 TUBB4AP04350 444 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 CLTAP09496 248 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 STAG3L1P0CL83 205 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 FERP16591 822 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 HOXA11P31270 313 aaPredicted RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 PTK2Q05397 1052 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 BIRC3Q13489 604 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 GDF6Q6KF10 455 aaPredicted RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 CATSPER4Q7RTX7 472 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 RNF180Q86T96 592 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 FMNL3Q8IVF7 1028 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 PPM1KQ8N3J5 372 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 HELQQ8TDG4 1101 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
CBWD1-220ENST00000612045 RPF1Q9H9Y2 349 aaKnown RBP13.29□□□□□ -0.28
CBWD1-220ENST00000612045 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
CBWD1-220ENST00000612045 VNN1O95497 513 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 GRK4P32298 578 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 ARHGAP25P42331 645 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 PIK3CAP42336 1068 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
CBWD1-220ENST00000612045 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
CBWD1-220ENST00000612045 POU5F1Q01860 360 aaKnown RBP13.28□□□□□ -0.28
CBWD1-220ENST00000612045 GFPT1Q06210 699 aaPredicted RBP13.28□□□□□ -0.28
CBWD1-220ENST00000612045 SNX17Q15036 470 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 KYAT1Q16773 422 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 FAM47CQ5HY64 1035 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
CBWD1-220ENST00000612045 SESTD1Q86VW0 696 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 TMEM40Q8WWA1 233 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 KAT5Q92993 513 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 KREMEN1Q96MU8 473 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 ADPGKQ9BRR6 497 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 PI4K2AQ9BTU6 479 aa13.28□□□□□ -0.28
CBWD1-220ENST00000612045 RBAK-RBAKDNI3L0D1 243 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 B4GALT4O60513 344 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 IL18RAPO95256 599 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 CCDC172P0C7W6 258 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 CXCL8P10145 99 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 MFAP3P55082 362 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 SLC18A3Q16572 532 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 DUOXA2Q1HG44 320 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 KIAA1328Q86T90 577 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms