RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 SLC10A6Q3KNW5 377 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 LRIT3Q3SXY7 679 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 VWA3BQ502W6 1294 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 SEZ6Q53EL9 994 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 MIIPQ5JXC2 388 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 C1orf220Q5T0J3 134 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 ALKAL1Q6UXT8 129 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 SLC24A5Q71RS6 500 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 CD302Q8IX05 232 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 TMEM192Q8IY95 271 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 TMEM199Q8N511 208 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 SLC35C1Q96A29 364 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 NAP1L5Q96NT1 182 aaPredicted RBP17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 ASB7Q9H672 318 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 RTN4Q9NQC3 1192 aaKnown RBP17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 SNTG2Q9NY99 539 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 TAB2Q9NYJ8 693 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 TTC26A0AVF1 554 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 PMM2O15305 246 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 MEFVO15553 781 aaPredicted RBP17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 TPM2P07951 284 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 PFKMP08237 780 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 KCNH2Q12809 1159 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 FILIP1LQ4L180 1135 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 XKR4Q5GH76 650 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 GPR153Q6NV75 609 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 CNKSR3Q6P9H4 555 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 HACE1Q8IYU2 909 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 TDHQ8IZJ6 230 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 LINC01599Q8WXQ3 324 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 TSPAN18Q96SJ8 248 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 NDST4Q9H3R1 872 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 SCN5AQ14524 2016 aa17.33■□□□□ 0.36
CLTCL1-207ENST00000611723 LRRIQ3A6PVS8 624 aaPredicted RBP17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 LGALS16A8MUM7 142 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 LACTBL1A8MY62 500 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 STX10O60499 249 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 EOMESO95936 686 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 WNT7BP56706 349 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 OSTNP61366 133 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 DLG4P78352 724 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 TCTN1Q2MV58 587 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 ZNF598Q86UK7 904 aaKnown RBP17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 ECHDC2Q86YB7 292 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 NT5DC4Q86YG4 428 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 PGBD4Q96DM1 585 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 UBE2OQ9C0C9 1292 aaKnown RBP17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 VPS16Q9H269 839 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 NXF3Q9H4D5 531 aaKnown RBP17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 PDE11AQ9HCR9 933 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 UBN1Q9NPG3 1134 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 IFNKQ9P0W0 207 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 GIT1Q9Y2X7 761 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 HES2Q9Y543 173 aa17.32■□□□□ 0.36
CLTCL1-207ENST00000611723 RBAK-RBAKDNI3L0D1 243 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 P4HA2O15460 535 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 RECQL4O94761 1208 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 AFPP02771 609 aaKnown RBP17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 CXCL8P10145 99 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 ITGA4P13612 1032 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 CSF2RAP15509 400 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 ATF7P17544 494 aaPredicted RBP17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 AP3M2P53677 418 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 YARSP54577 528 aaKnown RBP17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 DEFB128Q7Z7B8 93 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 CCDC127Q96BQ5 260 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 SNX27Q96L92 541 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 FNBP1Q96RU3 617 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 CGRRF1Q99675 332 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 TRIM5Q9C035 493 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 XPO4Q9C0E2 1151 aaKnown RBP17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 TOPORSQ9NS56 1045 aaPredicted RBP17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 DERAQ9Y315 318 aa17.31■□□□□ 0.36
CLTCL1-207ENST00000611723 A0A0C4DFX4 3053 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 ABHD14A-ACY1A0A1B0GW23 586 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 GTPBP10A4D1E9 387 aaKnown RBP17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 C4BPAP04003 597 aaKnown RBP17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 TRIM49P0CI25 452 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 TRIM49CP0CI26 452 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 KCNE1P15382 129 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 AKAP5P24588 427 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 FMO5P49326 533 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 ZNF75DP51815 510 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 PLCB2Q00722 1185 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 PPP3CAQ08209 521 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 IKBKEQ14164 716 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 DCAF17Q5H9S7 520 aaPredicted RBP17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 TCERG1LQ5VWI1 586 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 AGMOQ6ZNB7 445 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 C15orf39Q6ZRI6 1047 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 WDR49Q8IV35 697 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 ZNF516Q92618 1163 aa17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 POP1Q99575 1024 aaKnown RBP17.3■□□□□ 0.36
CLTCL1-207ENST00000611723 TMEM8AQ9HCN3 771 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms