RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 DNM2P50570 870 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 CYP2J2P51589 502 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 PEX3P56589 373 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 ERVK-9P63128 1117 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 EPM2AIP1Q7L775 607 aaPredicted RBP17.11■□□□□ 0.33
RTN1-209ENST00000611068 ZNF572Q7Z3I7 529 aaPredicted RBP17.11■□□□□ 0.33
RTN1-209ENST00000611068 FBXO16Q8IX29 292 aaPredicted RBP17.11■□□□□ 0.33
RTN1-209ENST00000611068 BRI3BPQ8WY22 251 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 K7ENM7 598 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 SLC16A4O15374 487 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 ATP2A2P16615 1042 aaKnown RBP17.11■□□□□ 0.33
RTN1-209ENST00000611068 KCTD2Q14681 263 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 DBN1Q16643 649 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 DCAF17Q5H9S7 520 aaPredicted RBP17.11■□□□□ 0.33
RTN1-209ENST00000611068 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 CST9Q5W186 159 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 ZNF720Q7Z2F6 126 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 KIF2BQ8N4N8 673 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 CCDC197Q8NCU1 140 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
RTN1-209ENST00000611068 COPS5Q92905 334 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 BICD1Q96G01 975 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 MS4A4AQ96JQ5 239 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 FIZ1Q96SL8 496 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 PCIF1Q9H4Z3 704 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 CAPN6Q9Y6Q1 641 aa17.11■□□□□ 0.33
RTN1-209ENST00000611068 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 AKAP3O75969 853 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 ARIH2O95376 493 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 CNGA1P29973 690 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 JAK3P52333 1124 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 MTERF2Q49AM1 385 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 ODF2Q5BJF6 829 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 GJC2Q5T442 439 aaPredicted RBP17.1■□□□□ 0.33
RTN1-209ENST00000611068 PHC3Q8NDX5 983 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 GDF3Q9NR23 364 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 PDGFCQ9NRA1 345 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 FBXO40Q9UH90 709 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 GGT7Q9UJ14 662 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 PFASO15067 1338 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
RTN1-209ENST00000611068 MARK3P27448 753 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 ITIH3Q06033 890 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 GRM1Q13255 1194 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 IFT20Q8IY31 132 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 MREGQ8N565 214 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 ZSWIM2Q8NEG5 633 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 RPS6KC1Q96S38 1066 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 ADAM22Q9P0K1 906 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 LCTP09848 1927 aa17.1■□□□□ 0.33
RTN1-209ENST00000611068 CFAP73A6NFT4 308 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 GOLGA6L10A6NI86 522 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 CETN3O15182 167 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 HEXIM1O94992 359 aaKnown RBP17.09■□□□□ 0.33
RTN1-209ENST00000611068 NR3C1P04150 777 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 GSTA1P08263 222 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 MYZAPP0CAP1 466 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 TEX9Q8N6V9 391 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 C2orf69Q8N8R5 385 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 FAM133AQ8N9E0 248 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 CASKIN2Q8WXE0 1202 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 MS4A14Q96JA4 679 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 PTPN18Q99952 460 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 FAM170AA1A519 330 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 IGF2BP3O00425 579 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTN1-209ENST00000611068 NCK2O43639 380 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 FGFR1OPO95684 399 aaKnown RBP17.09■□□□□ 0.33
RTN1-209ENST00000611068 KRT16P08779 473 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 SFNP31947 248 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 PRKCEQ02156 737 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 ENOX2Q16206 610 aaKnown RBP17.09■□□□□ 0.33
RTN1-209ENST00000611068 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 ZNF746Q6NUN9 644 aaPredicted RBP17.09■□□□□ 0.33
RTN1-209ENST00000611068 XRRA1Q6P2D8 792 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 TRIM50Q86XT4 487 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 FGD4Q96M96 766 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 PREBQ9HCU5 417 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 ABCF3Q9NUQ8 709 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 ZMYND8Q9ULU4 1186 aaPredicted RBP17.09■□□□□ 0.33
RTN1-209ENST00000611068 STK38LQ9Y2H1 464 aa17.09■□□□□ 0.33
RTN1-209ENST00000611068 LUC7L2Q9Y383 392 aaKnown RBP17.09■□□□□ 0.33
RTN1-209ENST00000611068 ZMYM2Q9UBW7 1377 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 SMAPO00193 183 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 PSAPP07602 524 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 PAEPP09466 180 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 GAP43P17677 238 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 RFC5P40937 340 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 PPP2R2AP63151 447 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 KCTD19Q17RG1 926 aaPredicted RBP17.08■□□□□ 0.33
RTN1-209ENST00000611068 C4orf19Q8IY42 314 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 NEK9Q8TD19 979 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 IWS1Q96ST2 819 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 NLRC4Q9NPP4 1024 aa17.08■□□□□ 0.33
RTN1-209ENST00000611068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.08■□□□□ 0.33
RTN1-209ENST00000611068 SCN4AP35499 1836 aa17.08■□□□□ 0.32
RTN1-209ENST00000611068 RBM47A0AV96 593 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms