RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 NFS1Q9Y697 457 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 DLATP10515 647 aaKnown RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 NR1D1P20393 614 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 ARL2P36404 184 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 SLC1A1P43005 524 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 AP3M2P53677 418 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 RWDD2BP57060 319 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 GNGT1P63211 74 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 UAP1Q16222 522 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 MTERF2Q49AM1 385 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 DNAJC21Q5F1R6 531 aaKnown RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TRIM72Q6ZMU5 477 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 CROCCP2Q86T23 111 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 DDX42Q86XP3 938 aaKnown RBP eCLIP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 SLC7A3Q8WY07 619 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TATDN2Q93075 761 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 FMO2Q99518 471 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TXLNGYQ9BZA5 131 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 NEUROG2Q9H2A3 272 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 GPRC5DQ9NZD1 345 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 AGO2Q9UKV8 859 aaKnown RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 LOC285556D6RIA3 1793 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 K7ERI5 159 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 SPOPO43791 374 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 C4BPAP04003 597 aaKnown RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 TGFB3P10600 412 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 UNGP13051 313 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 PTGIRP43119 386 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 FNTAP49354 379 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 ZNF211Q13398 564 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 NEDD9Q14511 834 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 LBX2Q6XYB7 198 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 SRLQ86TD4 932 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 SPATS2Q86XZ4 545 aaKnown RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 SLC13A5Q86YT5 568 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 JAMLQ86YT9 394 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 RIOX2Q8IUF8 465 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 EXOC8Q8IYI6 725 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 ANKRD35Q8N283 1001 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 PRELID2Q8N945 189 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 C12orf50Q8NA57 414 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 DEPTORQ8TB45 409 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 KRT35Q92764 455 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 VCPIP1Q96JH7 1222 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 ZDHHC18Q9NUE0 388 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 CNOT8Q9UFF9 292 aaKnown RBP11.19□□□□□ -0.62
PABPC1-224ENST00000610907 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
PABPC1-224ENST00000610907 MYH9P35579 1960 aaKnown RBP11.18□□□□□ -0.62
PABPC1-224ENST00000610907 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 KRT5P13647 590 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 ATP4AP20648 1035 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 GLRA2P23416 452 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 EDNRBP24530 442 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 TBXAS1P24557 533 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-224ENST00000610907 SOX10P56693 466 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 SP2Q02086 613 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 DHX9Q08211 1270 aaKnown RBP11.18□□□□□ -0.62
PABPC1-224ENST00000610907 ZNF844Q08AG5 666 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 GRM1Q13255 1194 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 NAA35Q5VZE5 725 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 FAM160B1Q5W0V3 765 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 CYFIP1Q7L576 1253 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 MCOLN2Q8IZK6 566 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 GPC2Q8N158 579 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 BCAS4Q8TDM0 211 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 ATP8B4Q8TF62 1192 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 UBLCP1Q8WVY7 318 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-224ENST00000610907 ZNF516Q92618 1163 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 SLCO2A1Q92959 643 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 CEP89Q96ST8 783 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 DPH5Q9H2P9 285 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 LRRC19Q9H756 370 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 ERVK-5Q9HDB9 667 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 TOPORSQ9NS56 1045 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-224ENST00000610907 MTRF1LQ9UGC7 380 aaKnown RBP11.18□□□□□ -0.62
PABPC1-224ENST00000610907 RSPH14Q9UHP6 348 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 CNTN6Q9UQ52 1028 aa11.18□□□□□ -0.62
PABPC1-224ENST00000610907 RRP15Q9Y3B9 282 aaKnown RBP11.18□□□□□ -0.62
PABPC1-224ENST00000610907 A0A0B4J269 797 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 TMEM110-MUSTN1A8MSY1 372 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 EBAG9O00559 213 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 FSCN2O14926 492 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 GAS2O43903 313 aaKnown RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 USP2O75604 605 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 HLA-DRAP01903 254 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 CYP1A1P04798 512 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 NUDT17P0C025 328 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 PYGMP11217 842 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 TNNI1P19237 187 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 MAN1A1P33908 653 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 COILP38432 576 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 MDH1P40925 334 aaKnown RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 ALDH5A1P51649 535 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 EFNA5P52803 228 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 CENPCQ03188 943 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 PTP4A2Q12974 167 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms