RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 GPR149Q86SP6 731 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 GPBP1Q86WP2 473 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 CMASQ8NFW8 434 aaPredicted RBP14.13□□□□□ -0.15
SNX20-205ENST00000610485 HASPINQ8TF76 798 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 EDAQ92838 391 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 SNX21Q969T3 373 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 REEP2Q9BRK0 252 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 TOPORSQ9NS56 1045 aaPredicted RBP14.13□□□□□ -0.15
SNX20-205ENST00000610485 FBXO2Q9UK22 296 aaPredicted RBP14.13□□□□□ -0.15
SNX20-205ENST00000610485 NR2E1Q9Y466 385 aa14.13□□□□□ -0.15
SNX20-205ENST00000610485 MORC2Q9Y6X9 1032 aaPredicted RBP14.13□□□□□ -0.15
SNX20-205ENST00000610485 TDRD15B5MCY1 1934 aaKnown RBP14.13□□□□□ -0.15
SNX20-205ENST00000610485 SMIM28A0A1B0GU29 152 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 H0YCG3 227 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 PAPLNO95428 1278 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 GLUD1P00367 558 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 SCP2P22307 547 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 YARSP54577 528 aaKnown RBP14.12□□□□□ -0.15
SNX20-205ENST00000610485 ELAVL2Q12926 359 aaKnown RBP14.12□□□□□ -0.15
SNX20-205ENST00000610485 MCM6Q14566 821 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 RTP2Q5QGT7 225 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 ATAT1Q5SQI0 421 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 TMC5Q6UXY8 1006 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 C15orf39Q6ZRI6 1047 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 ZBTB33Q86T24 672 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 RASSF8Q8NHQ8 419 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 FEZF2Q8TBJ5 459 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 HDAC7Q8WUI4 952 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 RIN2Q8WYP3 895 aaPredicted RBP14.12□□□□□ -0.15
SNX20-205ENST00000610485 SNX27Q96L92 541 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 UROC1Q96N76 676 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 TCHPQ9BT92 498 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 RHOBTB2Q9BYZ6 727 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 MAN1C1Q9NR34 630 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 DPP7Q9UHL4 492 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 RAPGEFL1Q9UHV5 662 aa14.12□□□□□ -0.15
SNX20-205ENST00000610485 SRPRBQ9Y5M8 271 aaKnown RBP14.12□□□□□ -0.15
SNX20-205ENST00000610485 MEFVO15553 781 aaPredicted RBP14.11□□□□□ -0.15
SNX20-205ENST00000610485 STX6O43752 255 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 KCNE1P15382 129 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
SNX20-205ENST00000610485 CLCNKBP51801 687 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 OSTNP61366 133 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 MCL1Q07820 350 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 DHX8Q14562 1220 aaKnown RBP14.11□□□□□ -0.15
SNX20-205ENST00000610485 NOLC1Q14978 699 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNX20-205ENST00000610485 UPP1Q16831 310 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 FAM171A1Q5VUB5 890 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 LILRA6Q6PI73 481 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 ELMSAN1Q6PJG2 1045 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 CD300LGQ6UXG3 332 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 USP49Q70CQ1 688 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 HAUS6Q7Z4H7 955 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 PIK3R5Q8WYR1 880 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 LARP4BQ92615 738 aaKnown RBP14.11□□□□□ -0.15
SNX20-205ENST00000610485 EPSTI1Q96J88 318 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 ZBTB45Q96K62 511 aaPredicted RBP14.11□□□□□ -0.15
SNX20-205ENST00000610485 ACAP3Q96P50 834 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 TTPALQ9BTX7 342 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 ZSCAN16Q9H4T2 348 aaPredicted RBP14.11□□□□□ -0.15
SNX20-205ENST00000610485 PARVGQ9HBI0 331 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 CNTN3Q9P232 1028 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 USTQ9Y2C2 406 aa14.11□□□□□ -0.15
SNX20-205ENST00000610485 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 C2CD4DB7Z1M9 353 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 TGM5O43548 720 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 FAM13AO94988 1023 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 RPL17P18621 184 aaKnown RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 SP100P23497 879 aaPredicted RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 IGFBP6P24592 240 aaPredicted RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 DDIT3P35638 169 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 ZXDAP98168 799 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 SOX4Q06945 474 aaPredicted RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 PTPN21Q16825 1174 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 SPECC1Q5M775 1068 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 DCLRE1AQ6PJP8 1040 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 PRSS55Q6UWB4 352 aaPredicted RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 CYP26C1Q6V0L0 522 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 ZDHHC14Q8IZN3 488 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 LNX1Q8TBB1 728 aaPredicted RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 ZMAT2Q96NC0 199 aaKnown RBP14.1□□□□□ -0.15
SNX20-205ENST00000610485 USP28Q96RU2 1077 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 FIZ1Q96SL8 496 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 PLEKHA4Q9H4M7 779 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 GOLGA2P5Q9HBQ8 144 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 SLC38A7Q9NVC3 462 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 ANKFY1Q9P2R3 1169 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 STK17AQ9UEE5 414 aa14.1□□□□□ -0.15
SNX20-205ENST00000610485 CLDN3O15551 220 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 TRAK2O60296 914 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 B3GAT3O94766 335 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 PIGRP01833 764 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 KRT18P05783 430 aaKnown RBP14.09□□□□□ -0.15
SNX20-205ENST00000610485 HARSP12081 509 aaKnown RBP14.09□□□□□ -0.15
SNX20-205ENST00000610485 FGFR3P22607 806 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 CEBPZQ03701 1054 aaKnown RBP14.09□□□□□ -0.15
SNX20-205ENST00000610485 SLC39A14Q15043 492 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms