RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 KIAA0319Q5VV43 1072 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 CCDC73Q6ZRK6 1079 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 MYCT1Q8N699 235 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 HDAC7Q8WUI4 952 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 EPSTI1Q96J88 318 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 RIPOR3Q96MK2 946 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 ACAP3Q96P50 834 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 PPP1R10Q96QC0 940 aaKnown RBP16.54■□□□□ 0.24
LMBR1-220ENST00000609081 USP28Q96RU2 1077 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 FNIP2Q9P278 1114 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 LOC730098B7Z3J9 87 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 ABLIM1O14639 778 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 TRAK2O60296 914 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 PPP6R2O75170 966 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 DHX8Q14562 1220 aaKnown RBP16.53■□□□□ 0.24
LMBR1-220ENST00000609081 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 FAM173BQ6P4H8 233 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 ALKAL1Q6UXT8 129 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 CYP26C1Q6V0L0 522 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 DDX27Q96GQ7 796 aaKnown RBP16.53■□□□□ 0.24
LMBR1-220ENST00000609081 SFXN1Q9H9B4 322 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 SEL1LQ9UBV2 794 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 C5orf42Q9H799 3197 aa16.53■□□□□ 0.24
LMBR1-220ENST00000609081 NPHP3-ACAD11A0A0J9YXS1 232 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 SMIM28A0A1B0GU29 152 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 CASTOR2A6NHX0 329 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 DCXO43602 365 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 TRAPPC3O43617 180 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 YEATS4O95619 227 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 PIGRP01833 764 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 KCNE1P15382 129 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
LMBR1-220ENST00000609081 MCL1Q07820 350 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 STK38Q15208 465 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 ATAT1Q5SQI0 421 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 DCLRE1AQ6PJP8 1040 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 LINC00301Q8NCQ3 95 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 BICD1Q96G01 975 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 SNX27Q96L92 541 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 FBXL18Q96ME1 805 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 TSPAN18Q96SJ8 248 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 RHOBTB2Q9BYZ6 727 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 GPR62Q9BZJ7 368 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 ST6GALNAC4Q9H4F1 302 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 PLEKHA5Q9HAU0 1116 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 CNTN3Q9P232 1028 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 NR2E1Q9Y466 385 aa16.52■□□□□ 0.24
LMBR1-220ENST00000609081 MTCL1Q9Y4B5 1905 aaKnown RBP16.52■□□□□ 0.23
LMBR1-220ENST00000609081 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 K7ENM7 598 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 C2CD2LO14523 706 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 HNRNPDLO14979 420 aaKnown RBP16.51■□□□□ 0.23
LMBR1-220ENST00000609081 TEX28O15482 410 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 GPR37L1O60883 481 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 GLUD1P00367 558 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 CLTAP09496 248 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 ZSCAN22P10073 491 aaPredicted RBP16.51■□□□□ 0.23
LMBR1-220ENST00000609081 EPCAMP16422 314 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 GAP43P17677 238 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 LIG4P49917 911 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 C15orf39Q6ZRI6 1047 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 USP49Q70CQ1 688 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 CMASQ8NFW8 434 aaPredicted RBP16.51■□□□□ 0.23
LMBR1-220ENST00000609081 LRRC15Q8TF66 581 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 PIK3R5Q8WYR1 880 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 HVCN1Q96D96 273 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 CLIC6Q96NY7 704 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 TTPALQ9BTX7 342 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 PLEKHA4Q9H4M7 779 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 ANKFY1Q9P2R3 1169 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
LMBR1-220ENST00000609081 PDCD11Q14690 1871 aaKnown RBP16.5■□□□□ 0.23
LMBR1-220ENST00000609081 F8W810 466 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 SPTLC2O15270 562 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 B3GAT3O94766 335 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 KIF4AO95239 1232 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 RPL9P32969 192 aaKnown RBP16.5■□□□□ 0.23
LMBR1-220ENST00000609081 STAT6P42226 847 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 GTF2BQ00403 316 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
LMBR1-220ENST00000609081 TMEM31Q5JXX7 168 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
LMBR1-220ENST00000609081 TAS1R1Q7RTX1 841 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 CEP120Q8N960 986 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 RIN2Q8WYP3 895 aaPredicted RBP16.5■□□□□ 0.23
LMBR1-220ENST00000609081 PAAF1Q9BRP4 392 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 LRRC27Q9C0I9 530 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 ZHX3Q9H4I2 956 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
LMBR1-220ENST00000609081 MATR3P43243 847 aaKnown RBP eCLIP16.49■□□□□ 0.23
LMBR1-220ENST00000609081 OSTNP61366 133 aa16.49■□□□□ 0.23
LMBR1-220ENST00000609081 UPP1Q16831 310 aa16.49■□□□□ 0.23
LMBR1-220ENST00000609081 GLRA4Q5JXX5 417 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms