RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ODF2LQ9ULJ1 636 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 C5orf42Q9H799 3197 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 TEX28O15482 410 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 NR1I2O75469 434 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 TADA2AO75478 443 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 MCF2P10911 925 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 RPL17P18621 184 aaKnown RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 KLRC2P26717 231 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 NMT1P30419 496 aaKnown RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 NASPP49321 788 aaPredicted RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 ZNF131P52739 623 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 SMTNP53814 917 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 DSG1Q02413 1049 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 CBX2Q14781 532 aaPredicted RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 DYMQ7RTS9 669 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 HAUS6Q7Z4H7 955 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 C3orf58Q8NDZ4 430 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 RIN2Q8WYP3 895 aaPredicted RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 SNX27Q96L92 541 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 CCDC94Q9BW85 323 aaPredicted RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 EMILIN2Q9BXX0 1053 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 PANK2Q9BZ23 570 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 IKZF4Q9H2S9 585 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 POMKQ9H5K3 350 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 CHST7Q9NS84 486 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 LARSQ9P2J5 1176 aaKnown RBP13.47□□□□□ -0.25
CTSA-210ENST00000606000 RAPGEFL1Q9UHV5 662 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 CITO14578 2027 aa13.47□□□□□ -0.25
CTSA-210ENST00000606000 SMIM28A0A1B0GU29 152 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 LOC730098B7Z3J9 87 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 TISP43B9A030 160 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 PI4K2BG5E9Z4 385 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 I3L4J1 428 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 TOM1L1O75674 476 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 BRD1O95696 1058 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 SPATA31D3P0C874 917 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 DDIT3P35638 169 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 TNFSF9P41273 254 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 CLCNKBP51801 687 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 SPAG1Q07617 926 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTSA-210ENST00000606000 STK38Q15208 465 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 ZC2HC1CQ53FD0 456 aaPredicted RBP13.46□□□□□ -0.25
CTSA-210ENST00000606000 ZBTB41Q5SVQ8 909 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 KIAA1841Q6NSI8 718 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 CD300LGQ6UXG3 332 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 ALKAL1Q6UXT8 129 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 TMC5Q6UXY8 1006 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 SPATA31D4Q6ZUB0 917 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 SFR1Q86XK3 245 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 RNF135Q8IUD6 432 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.25
CTSA-210ENST00000606000 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 C18orf25Q96B23 403 aaPredicted RBP13.46□□□□□ -0.25
CTSA-210ENST00000606000 BICD1Q96G01 975 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 FBXL18Q96ME1 805 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 POP1Q99575 1024 aaKnown RBP13.46□□□□□ -0.25
CTSA-210ENST00000606000 PHF7Q9BWX1 381 aaPredicted RBP13.46□□□□□ -0.25
CTSA-210ENST00000606000 ADAM7Q9H2U9 754 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 PARVGQ9HBI0 331 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
CTSA-210ENST00000606000 SF3B1O75533 1304 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTSA-210ENST00000606000 MYMKA6NI61 221 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 TRAK2O60296 914 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 TBCAO75347 108 aaKnown RBP13.45□□□□□ -0.26
CTSA-210ENST00000606000 F13A1P00488 732 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 ZSCAN22P10073 491 aaPredicted RBP13.45□□□□□ -0.26
CTSA-210ENST00000606000 CXCL8P10145 99 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 HOXB8P17481 243 aaPredicted RBP13.45□□□□□ -0.26
CTSA-210ENST00000606000 MATR3P43243 847 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTSA-210ENST00000606000 BRCC3P46736 316 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 YARSP54577 528 aaKnown RBP13.45□□□□□ -0.26
CTSA-210ENST00000606000 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 XKR4Q5GH76 650 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 FAM171A1Q5VUB5 890 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 RRAGBQ5VZM2 374 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 SLC39A4Q6P5W5 647 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 ZPBP2Q6X784 338 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 APBB1IPQ7Z5R6 666 aaPredicted RBP13.45□□□□□ -0.26
CTSA-210ENST00000606000 CEP57Q86XR8 500 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 PDILTQ8N807 584 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 DDX12PQ92771 950 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 CHAMP1Q96JM3 812 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 ACAP3Q96P50 834 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 RXFP1Q9HBX9 757 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 DZANK1Q9NVP4 752 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 STK17AQ9UEE5 414 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 STK39Q9UEW8 545 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 TBX20Q9UMR3 447 aa13.45□□□□□ -0.26
CTSA-210ENST00000606000 MORC2Q9Y6X9 1032 aaPredicted RBP13.45□□□□□ -0.26
CTSA-210ENST00000606000 HNRNPDLO14979 420 aaKnown RBP13.44□□□□□ -0.26
CTSA-210ENST00000606000 SPTLC2O15270 562 aa13.44□□□□□ -0.26
CTSA-210ENST00000606000 ADAM12O43184 909 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms