RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 TIPINQ9BVW5 301 aa11.71□□□□□ -0.53
TUBE1-210ENST00000604967 STRA6Q9BX79 667 aa11.71□□□□□ -0.53
TUBE1-210ENST00000604967 MRPL4Q9BYD3 311 aaKnown RBP11.71□□□□□ -0.53
TUBE1-210ENST00000604967 POMKQ9H5K3 350 aa11.71□□□□□ -0.53
TUBE1-210ENST00000604967 C17orf75Q9HAS0 396 aa11.71□□□□□ -0.53
TUBE1-210ENST00000604967 RXFP1Q9HBX9 757 aa11.71□□□□□ -0.53
TUBE1-210ENST00000604967 PRKAG3Q9UGI9 489 aa11.71□□□□□ -0.53
TUBE1-210ENST00000604967 ADAM28Q9UKQ2 775 aa11.71□□□□□ -0.53
TUBE1-210ENST00000604967 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
TUBE1-210ENST00000604967 ANKRD63C9JTQ0 380 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 I3L4J1 428 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 PPP1R37O75864 691 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 THP07101 528 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 SPATA31D3P0C874 917 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-210ENST00000604967 HARSP12081 509 aaKnown RBP11.7□□□□□ -0.54
TUBE1-210ENST00000604967 SP100P23497 879 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-210ENST00000604967 CA8P35219 290 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 CLCNKBP51801 687 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 CASP5P51878 434 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 WNT7BP56706 349 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 SPAG1Q07617 926 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 MCL1Q07820 350 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 RARS2Q5T160 578 aaKnown RBP11.7□□□□□ -0.54
TUBE1-210ENST00000604967 SCARA3Q6AZY7 606 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 MPZL3Q6UWV2 235 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 SPATA31D4Q6ZUB0 917 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 GLIS3Q8NEA6 775 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 STAMQ92783 540 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 CALML4Q96GE6 196 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 ZSCAN16Q9H4T2 348 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-210ENST00000604967 KCND2Q9NZV8 630 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 ODF2LQ9ULJ1 636 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 TBX20Q9UMR3 447 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 MYH11P35749 1972 aa11.7□□□□□ -0.54
TUBE1-210ENST00000604967 TOM1L1O75674 476 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 RFPL2O75678 378 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 F13A1P00488 732 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 PIGRP01833 764 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 MCF2P10911 925 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
TUBE1-210ENST00000604967 BRCC3P46736 316 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 GLUD2P49448 558 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 GUCY2FP51841 1108 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 UPP1Q16831 310 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 TMEM132AQ24JP5 1023 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 LILRA6Q6PI73 481 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 TMC5Q6UXY8 1006 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 DYMQ7RTS9 669 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 SFR1Q86XK3 245 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 RNF135Q8IUD6 432 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 GLYCTKQ8IVS8 523 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 HSCBQ8IWL3 235 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 MYCT1Q8N699 235 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 KRI1Q8N9T8 703 aaKnown RBP11.69□□□□□ -0.54
TUBE1-210ENST00000604967 LNX1Q8TBB1 728 aaPredicted RBP11.69□□□□□ -0.54
TUBE1-210ENST00000604967 DDX12PQ92771 950 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 FBXL18Q96ME1 805 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 CLSTN3Q9BQT9 956 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 ADPGKQ9BRR6 497 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 COLEC11Q9BWP8 271 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 ADAM7Q9H2U9 754 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 CNTN3Q9P232 1028 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 ANKFY1Q9P2R3 1169 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 TUBGCP4Q9UGJ1 667 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 MUTYHQ9UIF7 546 aa11.69□□□□□ -0.54
TUBE1-210ENST00000604967 TTC26A0AVF1 554 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 FRMD3A2A2Y4 597 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 K7ENM7 598 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 PPEF2O14830 753 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 SPTLC2O15270 562 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 TRAK2O60296 914 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 N4BP1O75113 896 aaKnown RBP11.68□□□□□ -0.54
TUBE1-210ENST00000604967 FAM13AO94988 1023 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 CXCL8P10145 99 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 KCNE1P15382 129 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 CASP1P29466 404 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 ADSSP30520 456 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 HOXD13P35453 343 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 GTF2BQ00403 316 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 NOLC1Q14978 699 aaKnown RBP eCLIP11.68□□□□□ -0.54
TUBE1-210ENST00000604967 ZBTB6Q15916 424 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 ENOX2Q16206 610 aaKnown RBP11.68□□□□□ -0.54
TUBE1-210ENST00000604967 FAM171A1Q5VUB5 890 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 RRAGBQ5VZM2 374 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 ZPBP2Q6X784 338 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 PDILTQ8N807 584 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 RIN2Q8WYP3 895 aaPredicted RBP11.68□□□□□ -0.54
TUBE1-210ENST00000604967 CASP10Q92851 521 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 HPS3Q969F9 1004 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 ZNF707Q96C28 371 aaPredicted RBP11.68□□□□□ -0.54
TUBE1-210ENST00000604967 FAM84AQ96KN4 292 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 RPGRIP1Q96KN7 1286 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 LRFN3Q9BTN0 628 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 PHF7Q9BWX1 381 aaPredicted RBP11.68□□□□□ -0.54
TUBE1-210ENST00000604967 SMOC2Q9H3U7 446 aa11.68□□□□□ -0.54
TUBE1-210ENST00000604967 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms