RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 ODF2LQ9ULJ1 636 aa28.56■■■□□ 2.16
PNKP-216ENST00000601816 CLIC4Q9Y696 253 aa28.56■■■□□ 2.16
PNKP-216ENST00000601816 BRD1O95696 1058 aa28.55■■■□□ 2.16
PNKP-216ENST00000601816 MAPTP10636 758 aaKnown RBP28.55■■■□□ 2.16
PNKP-216ENST00000601816 OSTNP61366 133 aa28.55■■■□□ 2.16
PNKP-216ENST00000601816 ELAVL2Q12926 359 aaKnown RBP28.55■■■□□ 2.16
PNKP-216ENST00000601816 DHX8Q14562 1220 aaKnown RBP28.55■■■□□ 2.16
PNKP-216ENST00000601816 KARSQ15046 597 aaKnown RBP28.55■■■□□ 2.16
PNKP-216ENST00000601816 FOXD4L1Q9NU39 408 aa28.55■■■□□ 2.16
PNKP-216ENST00000601816 BLOC1S4Q9NUP1 217 aa28.55■■■□□ 2.16
PNKP-216ENST00000601816 C2CD4DB7Z1M9 353 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 H0YCG3 227 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 ABLIM1O14639 778 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 HARSP12081 509 aaKnown RBP28.54■■■□□ 2.16
PNKP-216ENST00000601816 ZXDAP98168 799 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 RTP2Q5QGT7 225 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 FAM171A1Q5VUB5 890 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 CMASQ8NFW8 434 aaPredicted RBP28.54■■■□□ 2.16
PNKP-216ENST00000601816 LRRC15Q8TF66 581 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 RAD54LQ92698 747 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 UROC1Q96N76 676 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 REEP2Q9BRK0 252 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 TTPALQ9BTX7 342 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 ANKFY1Q9P2R3 1169 aa28.54■■■□□ 2.16
PNKP-216ENST00000601816 TOM1L1O75674 476 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 MCM6Q14566 821 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 PTPAQ15257 358 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 PTPN21Q16825 1174 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 PRSS55Q6UWB4 352 aaPredicted RBP28.53■■■□□ 2.16
PNKP-216ENST00000601816 ZPBP2Q6X784 338 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 C15orf39Q6ZRI6 1047 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 CEP57Q86XR8 500 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 PALB2Q86YC2 1186 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 TDRD5Q8NAT2 981 aaKnown RBP28.53■■■□□ 2.16
PNKP-216ENST00000601816 FEZF2Q8TBJ5 459 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 ACAP3Q96P50 834 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 CCSER1Q9C0I3 900 aa28.53■■■□□ 2.16
PNKP-216ENST00000601816 MYH11P35749 1972 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 SMIM28A0A1B0GU29 152 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 FAM13AO94988 1023 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 C1RP00736 705 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 RPL17P18621 184 aaKnown RBP28.52■■■□□ 2.16
PNKP-216ENST00000601816 NCKAP1LP55160 1127 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 XKR4Q5GH76 650 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 FAM173BQ6P4H8 233 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 GLYCTKQ8IVS8 523 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 HDAC7Q8WUI4 952 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 PIK3R5Q8WYR1 880 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 ZBTB45Q96K62 511 aaPredicted RBP28.52■■■□□ 2.16
PNKP-216ENST00000601816 SNX27Q96L92 541 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 MTMR6Q9Y217 621 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 USTQ9Y2C2 406 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 PLXNA3P51805 1871 aa28.52■■■□□ 2.16
PNKP-216ENST00000601816 TMEM189-UBE2V1I3L0A0 370 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 B3GAT3O94766 335 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 KRT18P05783 430 aaKnown RBP28.51■■■□□ 2.15
PNKP-216ENST00000601816 MYBP10242 640 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 MARCKSP29966 332 aaPredicted RBP28.51■■■□□ 2.15
PNKP-216ENST00000601816 CLCNKBP51801 687 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 NOLC1Q14978 699 aaKnown RBP eCLIP28.51■■■□□ 2.15
PNKP-216ENST00000601816 DCLRE1AQ6PJP8 1040 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 ALKAL1Q6UXT8 129 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 TRIM67Q6ZTA4 783 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 CCDC149Q6ZUS6 474 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 HAUS6Q7Z4H7 955 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 PLEKHA4Q9H4M7 779 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 SLC38A7Q9NVC3 462 aa28.51■■■□□ 2.15
PNKP-216ENST00000601816 FBXO2Q9UK22 296 aaPredicted RBP28.51■■■□□ 2.15
PNKP-216ENST00000601816 TGM5O43548 720 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 SPATA31D3P0C874 917 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 PSMD5Q16401 504 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 PDXDC1Q6P996 788 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.5■■■□□ 2.15
PNKP-216ENST00000601816 SPATA31D4Q6ZUB0 917 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 HFE2Q6ZVN8 426 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 MYCT1Q8N699 235 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 LARP4BQ92615 738 aaKnown RBP28.5■■■□□ 2.15
PNKP-216ENST00000601816 BICD1Q96G01 975 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 EPSTI1Q96J88 318 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 PARVGQ9HBI0 331 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 GOLGA2P5Q9HBQ8 144 aa28.5■■■□□ 2.15
PNKP-216ENST00000601816 SRPRBQ9Y5M8 271 aaKnown RBP28.5■■■□□ 2.15
PNKP-216ENST00000601816 CCDC195A0A1B0GUA6 201 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 TMEM221A6NGB7 291 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 M0R296 226 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 CLDN3O15551 220 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 KCNE1P15382 129 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 MATR3P43243 847 aaKnown RBP eCLIP28.49■■■□□ 2.15
PNKP-216ENST00000601816 CEBPZQ03701 1054 aaKnown RBP28.49■■■□□ 2.15
PNKP-216ENST00000601816 UPP1Q16831 310 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 SPECC1Q5M775 1068 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 CYP26C1Q6V0L0 522 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 ZDHHC14Q8IZN3 488 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 PLCD3Q8N3E9 789 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 KCNN1Q92952 543 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 CNTN3Q9P232 1028 aa28.49■■■□□ 2.15
PNKP-216ENST00000601816 K7ENM7 598 aa28.48■■■□□ 2.15
PNKP-216ENST00000601816 STX6O43752 255 aa28.48■■■□□ 2.15
PNKP-216ENST00000601816 TBCAO75347 108 aaKnown RBP28.48■■■□□ 2.15
PNKP-216ENST00000601816 RFPL2O75678 378 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms