RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 CREMQ03060 361 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 GRIN1Q05586 938 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 SF3A1Q15459 793 aaKnown RBP24.86■■□□□ 1.57
SSBP4-209ENST00000601357 ZDHHC14Q8IZN3 488 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 HDAC7Q8WUI4 952 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 DPP7Q9UHL4 492 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 KCNG1Q9UIX4 513 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 VWA8A3KMH1 1905 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 VPS37CA5D8V6 355 aaPredicted RBP24.85■■□□□ 1.57
SSBP4-209ENST00000601357 TMEM189-UBE2V1I3L0A0 370 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 MAPTP10636 758 aaKnown RBP24.85■■□□□ 1.57
SSBP4-209ENST00000601357 MCF2P10911 925 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 PDCP20941 246 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 LONP1P36776 959 aaKnown RBP24.85■■□□□ 1.57
SSBP4-209ENST00000601357 SIGLEC14Q08ET2 396 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 GLRA4Q5JXX5 417 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 LILRA6Q6PI73 481 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 KCNN1Q92952 543 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 ASIC4Q96FT7 647 aa24.85■■□□□ 1.57
SSBP4-209ENST00000601357 NPHP3-ACAD11A0A0J9YXS1 232 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 SMIM28A0A1B0GU29 152 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 SPDYE4A6NLX3 237 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 TGM5O43548 720 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 UBA7P41226 1012 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 PRSS55Q6UWB4 352 aaPredicted RBP24.84■■□□□ 1.57
SSBP4-209ENST00000601357 MPZL3Q6UWV2 235 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 CYP26C1Q6V0L0 522 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 TDRD5Q8NAT2 981 aaKnown RBP24.84■■□□□ 1.57
SSBP4-209ENST00000601357 PIK3R5Q8WYR1 880 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 TTPALQ9BTX7 342 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 CCDC94Q9BW85 323 aaPredicted RBP24.84■■□□□ 1.57
SSBP4-209ENST00000601357 PLEKHA4Q9H4M7 779 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 TOPORSQ9NS56 1045 aaPredicted RBP24.84■■□□□ 1.57
SSBP4-209ENST00000601357 BLOC1S4Q9NUP1 217 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 ZNF318Q5VUA4 2279 aa24.84■■□□□ 1.57
SSBP4-209ENST00000601357 CCDC195A0A1B0GUA6 201 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 RPL17P18621 184 aaKnown RBP24.83■■□□□ 1.57
SSBP4-209ENST00000601357 IGFBP6P24592 240 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-209ENST00000601357 SMTNP53814 917 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 YARSP54577 528 aaKnown RBP24.83■■□□□ 1.57
SSBP4-209ENST00000601357 ELAVL2Q12926 359 aaKnown RBP24.83■■□□□ 1.57
SSBP4-209ENST00000601357 UPP1Q16831 310 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 FAM171A1Q5VUB5 890 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 ELMSAN1Q6PJG2 1045 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 CD300LGQ6UXG3 332 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 PALB2Q86YC2 1186 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 KREMEN2Q8NCW0 462 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 LNX1Q8TBB1 728 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-209ENST00000601357 CALML4Q96GE6 196 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 MFSD14AQ96MC6 490 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 UROC1Q96N76 676 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 ODF2LQ9ULJ1 636 aa24.83■■□□□ 1.57
SSBP4-209ENST00000601357 CITO14578 2027 aa24.83■■□□□ 1.56
SSBP4-209ENST00000601357 MEFVO15553 781 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-209ENST00000601357 TOM1L1O75674 476 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 SPATA31D3P0C874 917 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 SYT1P21579 422 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 CLCNKBP51801 687 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 NCKAP1LP55160 1127 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 OSTNP61366 133 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 CACNB1Q02641 598 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-209ENST00000601357 STRN3Q13033 797 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 PTPAQ15257 358 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 DCLRE1AQ6PJP8 1040 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 ZPBP2Q6X784 338 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 SPATA31D4Q6ZUB0 917 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 CCDC149Q6ZUS6 474 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 ZBTB33Q86T24 672 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 PLCD3Q8N3E9 789 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 ZNF707Q96C28 371 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-209ENST00000601357 FAM122AQ96E09 287 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 INTS4Q96HW7 963 aaKnown RBP24.82■■□□□ 1.56
SSBP4-209ENST00000601357 ZBTB45Q96K62 511 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-209ENST00000601357 SNX27Q96L92 541 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 CLSTN3Q9BQT9 956 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 REEP2Q9BRK0 252 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 LARSQ9P2J5 1176 aaKnown RBP24.82■■□□□ 1.56
SSBP4-209ENST00000601357 SORCS3Q9UPU3 1222 aa24.82■■□□□ 1.56
SSBP4-209ENST00000601357 PDCD11Q14690 1871 aaKnown RBP24.81■■□□□ 1.56
SSBP4-209ENST00000601357 RFPL2O75678 378 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 KCNE1P15382 129 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 PLCG1P19174 1290 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 FGFR3P22607 806 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 SOX4Q06945 474 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-209ENST00000601357 RESTQ13127 1097 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-209ENST00000601357 GLYCTKQ8IVS8 523 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 ZMAT2Q96NC0 199 aaKnown RBP24.81■■□□□ 1.56
SSBP4-209ENST00000601357 TCHPQ9BT92 498 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 GOLGA2P5Q9HBQ8 144 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 ZDHHC7Q9NXF8 308 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 CNTN3Q9P232 1028 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 CLIC4Q9Y696 253 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 MYO10Q9HD67 2058 aa24.81■■□□□ 1.56
SSBP4-209ENST00000601357 B3GAT3O94766 335 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 MYBP10242 640 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 ZNF131P52739 623 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 MTMR3Q13615 1198 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 KARSQ15046 597 aaKnown RBP24.8■■□□□ 1.56
SSBP4-209ENST00000601357 PSMD5Q16401 504 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms