RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 BCL7CQ8WUZ0 217 aaPredicted RBP12.9□□□□□ -0.34
FARP1-230ENST00000600380 CLP1Q92989 425 aaKnown RBP12.9□□□□□ -0.34
FARP1-230ENST00000600380 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
FARP1-230ENST00000600380 EEF2KMTQ96G04 330 aa12.9□□□□□ -0.34
FARP1-230ENST00000600380 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
FARP1-230ENST00000600380 PDXKO00764 312 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 HOXA2O43364 376 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 EXTL3O43909 919 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 NR3C1P04150 777 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 SLC11A1P49279 550 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 ERVK-21P61565 698 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 DSC1Q08554 894 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 CCDC183Q5T5S1 534 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
FARP1-230ENST00000600380 Q7L0L9 218 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 APBB1IPQ7Z5R6 666 aaPredicted RBP12.89□□□□□ -0.35
FARP1-230ENST00000600380 TMEM173Q86WV6 379 aaPredicted RBP12.89□□□□□ -0.35
FARP1-230ENST00000600380 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 NOC3LQ8WTT2 800 aaKnown RBP12.89□□□□□ -0.35
FARP1-230ENST00000600380 FBXL18Q96ME1 805 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 PPP1R10Q96QC0 940 aaKnown RBP12.89□□□□□ -0.35
FARP1-230ENST00000600380 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
FARP1-230ENST00000600380 PAAF1Q9BRP4 392 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 CNTN3Q9P232 1028 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 TRAF3IP3Q9Y228 551 aa12.89□□□□□ -0.35
FARP1-230ENST00000600380 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 CDH23Q9H251 3354 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 NT5C1B-RDH14C9J2C7 533 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 NFICP08651 508 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 KCNE1P15382 129 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 BMPR1AP36894 532 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 STX17P56962 302 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 GRIN2CQ14957 1233 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 ZBTB6Q15916 424 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 PPP2R2DQ66LE6 453 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 HS2ST1Q7LGA3 356 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 SLC9A9Q8IVB4 645 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 EFCAB13Q8IY85 973 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 LRRC43Q8N309 656 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 XXYLT1Q8NBI6 393 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 COLGALT1Q8NBJ5 622 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 P2RX5Q93086 422 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 ZNF576Q9H609 170 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
FARP1-230ENST00000600380 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
FARP1-230ENST00000600380 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 KIAA1671Q9BY89 1806 aa12.88□□□□□ -0.35
FARP1-230ENST00000600380 AKAP3O75969 853 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 GALTP07902 379 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 CCNE1P24864 410 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 DNAJB1P25685 340 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 YARSP54577 528 aaKnown RBP12.87□□□□□ -0.35
FARP1-230ENST00000600380 BCAR1P56945 870 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 NLRP12P59046 1061 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
FARP1-230ENST00000600380 KLHL40Q2TBA0 621 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 JADE1Q6IE81 842 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 KCNT2Q6UVM3 1135 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
FARP1-230ENST00000600380 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 TRIML1Q8N9V2 468 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 TMEM174Q8WUU8 243 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 NELFBQ8WX92 580 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 ARNTL2Q8WYA1 636 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 DHTKD1Q96HY7 919 aaPredicted RBP12.87□□□□□ -0.35
FARP1-230ENST00000600380 FAM161BQ96MY7 647 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 TGS1Q96RS0 853 aaKnown RBP12.87□□□□□ -0.35
FARP1-230ENST00000600380 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
FARP1-230ENST00000600380 VN1R3Q9BXE9 311 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 PLEKHA5Q9HAU0 1116 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 TOPORSQ9NS56 1045 aaPredicted RBP12.87□□□□□ -0.35
FARP1-230ENST00000600380 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 CITO14578 2027 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 ANK1P16157 1881 aa12.87□□□□□ -0.35
FARP1-230ENST00000600380 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
FARP1-230ENST00000600380 PPEF2O14830 753 aa12.86□□□□□ -0.35
FARP1-230ENST00000600380 EXOC3O60645 756 aa12.86□□□□□ -0.35
FARP1-230ENST00000600380 LPXNO60711 386 aa12.86□□□□□ -0.35
FARP1-230ENST00000600380 ZC3H11AO75152 810 aaKnown RBP eCLIP12.86□□□□□ -0.356e-13■□□□□ 9.2
FARP1-230ENST00000600380 ITGB1P05556 798 aa12.86□□□□□ -0.35
FARP1-230ENST00000600380 THP07101 528 aa12.86□□□□□ -0.35
FARP1-230ENST00000600380 CTNNB1P35222 781 aa12.86□□□□□ -0.35
FARP1-230ENST00000600380 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
FARP1-230ENST00000600380 CYP24A1Q07973 514 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms