RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 F13A1P00488 732 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 GAP43P17677 238 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 NCKAP1LP55160 1127 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 OSTNP61366 133 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 AMPD3Q01432 767 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 ZP2Q05996 745 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 ITIH3Q06033 890 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 NOLC1Q14978 699 aaKnown RBP eCLIP15.47■□□□□ 0.078e-7■■■□□ 15.4
LIG1-218ENST00000599322 FUT10Q6P4F1 479 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 LINC00301Q8NCQ3 95 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 SMRP1Q8NCR6 262 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 AUTS2Q8WXX7 1259 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
LIG1-218ENST00000599322 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 SEL1LQ9UBV2 794 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 ATP6V1DQ9Y5K8 247 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 HCFC2Q9Y5Z7 792 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 TRIOO75962 3097 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 CASTOR2A6NHX0 329 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 XPOTO43592 962 aaKnown RBP15.46■□□□□ 0.07
LIG1-218ENST00000599322 GLP2RO95838 553 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
LIG1-218ENST00000599322 ZNF131P52739 623 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 PTPN14Q15678 1187 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 FOXD4L6Q3SYB3 417 aaPredicted RBP15.46■□□□□ 0.07
LIG1-218ENST00000599322 DCLRE1AQ6PJP8 1040 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 FOXD4L3Q6VB84 417 aaPredicted RBP15.46■□□□□ 0.07
LIG1-218ENST00000599322 DYMQ7RTS9 669 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 GPR65Q8IYL9 337 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 GSTCDQ8NEC7 633 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 BCL7CQ8WUZ0 217 aaPredicted RBP15.46■□□□□ 0.07
LIG1-218ENST00000599322 RIPOR3Q96MK2 946 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 NECTIN4Q96NY8 510 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 KLHL5Q96PQ7 755 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 PYM1Q9BRP8 204 aaKnown RBP15.46■□□□□ 0.07
LIG1-218ENST00000599322 PANK2Q9BZ23 570 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 CUEDC2Q9H467 287 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 TBX20Q9UMR3 447 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 EXOC7Q9UPT5 735 aa15.46■□□□□ 0.07
LIG1-218ENST00000599322 USP15Q9Y4E8 981 aaPredicted RBP15.46■□□□□ 0.07
LIG1-218ENST00000599322 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 PRR33A8MZF0 331 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 B4GALT3O60512 393 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 EDN1P05305 212 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 ALADP13716 330 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 IDEP14735 1019 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 MTHFRP42898 656 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 ME1P48163 572 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 ATAT1Q5SQI0 421 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 SLFN12LQ6IEE8 588 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 STXBP4Q6ZWJ1 553 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 USP49Q70CQ1 688 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 PDILTQ8N807 584 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 IQUBQ8NA54 791 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 DDX12PQ92771 950 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 MRPL44Q9H9J2 332 aaKnown RBP15.45■□□□□ 0.06
LIG1-218ENST00000599322 PTPRHQ9HD43 1115 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 MARCH5Q9NX47 278 aa15.45■□□□□ 0.06
LIG1-218ENST00000599322 MUC6Q6W4X9 2439 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 ZNF318Q5VUA4 2279 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 SMIM28A0A1B0GU29 152 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 PTGESO14684 152 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 B3GAT3O94766 335 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 BRD1O95696 1058 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 CLTAP09496 248 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 CNPP09543 421 aaKnown RBP15.44■□□□□ 0.06
LIG1-218ENST00000599322 PROZP22891 400 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 DSG1Q02413 1049 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 MCL1Q07820 350 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 HERC4Q5GLZ8 1057 aaPredicted RBP15.44■□□□□ 0.06
LIG1-218ENST00000599322 GLRA4Q5JXX5 417 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 TAS1R3Q7RTX0 852 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 CEP57Q86XR8 500 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 CCDC65Q8IXS2 484 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 RIN2Q8WYP3 895 aaPredicted RBP15.44■□□□□ 0.06
LIG1-218ENST00000599322 HVCN1Q96D96 273 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 FBXL18Q96ME1 805 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 TTPALQ9BTX7 342 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 APOL5Q9BWW9 433 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 PHF7Q9BWX1 381 aaPredicted RBP15.44■□□□□ 0.06
LIG1-218ENST00000599322 PLEKHA5Q9HAU0 1116 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 NUB1Q9Y5A7 615 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 PCDHB13Q9Y5F0 798 aa15.44■□□□□ 0.06
LIG1-218ENST00000599322 TDRD15B5MCY1 1934 aaKnown RBP15.43■□□□□ 0.06
LIG1-218ENST00000599322 GLUD1P00367 558 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 C1RP00736 705 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 RPL9P32969 192 aaKnown RBP15.43■□□□□ 0.06
LIG1-218ENST00000599322 PPP2R3AQ06190 1150 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 ALCAMQ13740 583 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 KCNC3Q14003 757 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 CBX2Q14781 532 aaPredicted RBP15.43■□□□□ 0.06
LIG1-218ENST00000599322 POSTNQ15063 836 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 RARS2Q5T160 578 aaKnown RBP15.43■□□□□ 0.06
LIG1-218ENST00000599322 KIAA0319Q5VV43 1072 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 SYCP3Q8IZU3 236 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 CEP120Q8N960 986 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 VN1R2Q8NFZ6 395 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 RABGGTAQ92696 567 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 KCNN1Q92952 543 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms