RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 VPS16Q9H269 839 aa22.65■■□□□ 1.22
IRF3-214ENST00000596788 TOPORSQ9NS56 1045 aaPredicted RBP22.65■■□□□ 1.22
IRF3-214ENST00000596788 ZMYND8Q9ULU4 1186 aaPredicted RBP22.65■■□□□ 1.22
IRF3-214ENST00000596788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.65■■□□□ 1.22
IRF3-214ENST00000596788 PTPRSQ13332 1948 aa22.65■■□□□ 1.22
IRF3-214ENST00000596788 TTC26A0AVF1 554 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 IL18RAPO95256 599 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 IBSPP21815 317 aaPredicted RBP22.64■■□□□ 1.21
IRF3-214ENST00000596788 PLCB2Q00722 1185 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 SLC24A5Q71RS6 500 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 ZNF598Q86UK7 904 aaKnown RBP22.64■■□□□ 1.21
IRF3-214ENST00000596788 HACE1Q8IYU2 909 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 FAM212AQ96EL1 285 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 NAP1L5Q96NT1 182 aaPredicted RBP22.64■■□□□ 1.21
IRF3-214ENST00000596788 CGRRF1Q99675 332 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 CXCL16Q9H2A7 254 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 IL23AQ9NPF7 189 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 INTS13Q9NVM9 706 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 IFNKQ9P0W0 207 aa22.64■■□□□ 1.21
IRF3-214ENST00000596788 A0A1B0GTH6 734 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.63■■□□□ 1.21
IRF3-214ENST00000596788 LRRC10BA6NIK2 292 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 LGALS16A8MUM7 142 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 LACTBL1A8MY62 500 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 TULP1O00294 542 aaPredicted RBP22.63■■□□□ 1.21
IRF3-214ENST00000596788 ENPP3O14638 875 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 PFKMP08237 780 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 ACRP10323 421 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 DLATP10515 647 aaKnown RBP22.63■■□□□ 1.21
IRF3-214ENST00000596788 SKIP12755 728 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 ITGA4P13612 1032 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 YARSP54577 528 aaKnown RBP22.63■■□□□ 1.21
IRF3-214ENST00000596788 FAM189BP81408 668 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 PPP2R3AQ06190 1150 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 VWA3BQ502W6 1294 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 LMBRD2Q68DH5 695 aaPredicted RBP22.63■■□□□ 1.21
IRF3-214ENST00000596788 AGMOQ6ZNB7 445 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 EFCAB13Q8IY85 973 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 DPF3Q92784 378 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 POP1Q99575 1024 aaKnown RBP22.63■■□□□ 1.21
IRF3-214ENST00000596788 KLK14Q9P0G3 267 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 PARP2Q9UGN5 583 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 TTC3P53804 2025 aa22.63■■□□□ 1.21
IRF3-214ENST00000596788 AFPP02771 609 aaKnown RBP22.62■■□□□ 1.21
IRF3-214ENST00000596788 NFICP08651 508 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 MRE11P49959 708 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 CLDN10P78369 228 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 FPGSQ05932 587 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 PPP3CAQ08209 521 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 PPIGQ13427 754 aaKnown RBP eCLIP22.62■■□□□ 1.216e-8■■■□□ 14.6
IRF3-214ENST00000596788 RPUSD2Q8IZ73 545 aaKnown RBP22.62■■□□□ 1.21
IRF3-214ENST00000596788 RNF169Q8NCN4 708 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 FNBP1Q96RU3 617 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 XPO4Q9C0E2 1151 aaKnown RBP22.62■■□□□ 1.21
IRF3-214ENST00000596788 NDST4Q9H3R1 872 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 MMRN2Q9H8L6 949 aa22.62■■□□□ 1.21
IRF3-214ENST00000596788 TDRD15B5MCY1 1934 aaKnown RBP22.62■■□□□ 1.21
IRF3-214ENST00000596788 TPM2P07951 284 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 UBASH3AP57075 661 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 KCNH2Q12809 1159 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 IKBKEQ14164 716 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 SURF1Q15526 300 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 XKR4Q5GH76 650 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 JADE1Q6IE81 842 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 ALKAL1Q6UXT8 129 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 USP37Q86T82 979 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 WDR49Q8IV35 697 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 ZNF516Q92618 1163 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 PGBD4Q96DM1 585 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 ASB7Q9H672 318 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 PLEKHA5Q9HAU0 1116 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
IRF3-214ENST00000596788 CNTN3Q9P232 1028 aa22.61■■□□□ 1.21
IRF3-214ENST00000596788 PES1O00541 588 aaKnown RBP22.6■■□□□ 1.21
IRF3-214ENST00000596788 MLH1P40692 756 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 GCLMP48507 274 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 FMO5P49326 533 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 EPHB4P54760 987 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 CBWD6Q4V339 395 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 CBWD3Q5JTY5 395 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 CBWD5Q5RIA9 395 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.6■■□□□ 1.21
IRF3-214ENST00000596788 C16orf59Q7L2K0 433 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 OR5B17Q8NGF7 314 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 ZFP42Q96MM3 310 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 ZMAT2Q96NC0 199 aaKnown RBP22.6■■□□□ 1.21
IRF3-214ENST00000596788 RNF19AQ9NV58 838 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 TMEM161AQ9NX61 479 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 GIT1Q9Y2X7 761 aa22.6■■□□□ 1.21
IRF3-214ENST00000596788 COL4A6Q14031 1691 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 ABHD14A-ACY1A0A1B0GW23 586 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 TEX33O43247 280 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 EOMESO95936 686 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 TNNI1P19237 187 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 MYL7Q01449 175 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 TMEM132DQ14C87 1099 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 FILIP1LQ4L180 1135 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 GLRA4Q5JXX5 417 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 CD302Q8IX05 232 aa22.59■■□□□ 1.21
IRF3-214ENST00000596788 GAD1Q99259 594 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms