RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 NKX2-4Q9H2Z4 354 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 RPF1Q9H9Y2 349 aaKnown RBP16.88■□□□□ 0.29
SMCO4-206ENST00000596676 MRPL42Q9Y6G3 142 aaKnown RBP16.88■□□□□ 0.29
SMCO4-206ENST00000596676 TTC26A0AVF1 554 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 SOX1O00570 391 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-206ENST00000596676 EXOC3O60645 756 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 AKAP3O75969 853 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 CA3P07451 260 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 IGFBP6P24592 240 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-206ENST00000596676 PBX3P40426 434 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 GUCY2FP51841 1108 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 SNRPFP62306 86 aaKnown RBP16.87■□□□□ 0.29
SMCO4-206ENST00000596676 ADAM9Q13443 819 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 BTG3Q14201 252 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-206ENST00000596676 STX1AQ16623 288 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 LMBRD2Q68DH5 695 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-206ENST00000596676 SLC9A9Q8IVB4 645 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 HACE1Q8IYU2 909 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 ABI1Q8IZP0 508 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 GOLGA5Q8TBA6 731 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 C18orf25Q96B23 403 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-206ENST00000596676 FBXL18Q96ME1 805 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 CWH43Q9H720 699 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 GOLGA2P5Q9HBQ8 144 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 PDE11AQ9HCR9 933 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 TBC1D13Q9NVG8 400 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 RBAKQ9NYW8 714 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-206ENST00000596676 DNAJB4Q9UDY4 337 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 INSL6Q9Y581 213 aa16.87■□□□□ 0.29
SMCO4-206ENST00000596676 SMIM28A0A1B0GU29 152 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 ZNF233A6NK53 670 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 LINC00271P0C7V0 271 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
SMCO4-206ENST00000596676 SOX4Q06945 474 aaPredicted RBP16.86■□□□□ 0.29
SMCO4-206ENST00000596676 SNRNP35Q16560 246 aaKnown RBP16.86■□□□□ 0.29
SMCO4-206ENST00000596676 ANO6Q4KMQ2 910 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 XKR4Q5GH76 650 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 JADE1Q6IE81 842 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 BRSK2Q8IWQ3 736 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 ZC3H3Q8IXZ2 948 aaKnown RBP16.86■□□□□ 0.29
SMCO4-206ENST00000596676 POP1Q99575 1024 aaKnown RBP16.86■□□□□ 0.29
SMCO4-206ENST00000596676 TSG101Q99816 390 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 NRDE2Q9H7Z3 1164 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 UBN1Q9NPG3 1134 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 ANO10Q9NW15 660 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
SMCO4-206ENST00000596676 RWDD2AQ9UIY3 292 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 PCDHA11Q9Y5I1 949 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 PTPRJQ12913 1337 aa16.86■□□□□ 0.29
SMCO4-206ENST00000596676 LINC01553A4QN01 128 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 F8W810 466 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 INPPL1O15357 1258 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 LDHAP00338 332 aaKnown RBP16.85■□□□□ 0.29
SMCO4-206ENST00000596676 NFICP08651 508 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 DLG4P78352 724 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 CYP24A1Q07973 514 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 NAB2Q15742 525 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 NFIL3Q16649 462 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 HSP90AA4PQ58FG1 418 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 EFCAB13Q8IY85 973 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 CMTR2Q8IYT2 770 aaKnown RBP16.85■□□□□ 0.29
SMCO4-206ENST00000596676 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-206ENST00000596676 KIF12Q96FN5 646 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 PPP1R10Q96QC0 940 aaKnown RBP16.85■□□□□ 0.29
SMCO4-206ENST00000596676 RPS6KC1Q96S38 1066 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 PAAF1Q9BRP4 392 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
SMCO4-206ENST00000596676 CERS4Q9HA82 394 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 TOPORSQ9NS56 1045 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-206ENST00000596676 CNTN3Q9P232 1028 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 TUBGCP4Q9UGJ1 667 aa16.85■□□□□ 0.29
SMCO4-206ENST00000596676 KIAA1671Q9BY89 1806 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 TDRD15B5MCY1 1934 aaKnown RBP16.84■□□□□ 0.29
SMCO4-206ENST00000596676 NT5C1B-RDH14C9J2C7 533 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 HOXA2O43364 376 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 LETM1O95202 739 aaPredicted RBP16.84■□□□□ 0.29
SMCO4-206ENST00000596676 PPP1R2P41236 205 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 RNASELQ05823 741 aaKnown RBP16.84■□□□□ 0.29
SMCO4-206ENST00000596676 LRRC63Q05C16 580 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 PPP2R3AQ06190 1150 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 KYAT1Q16773 422 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 FIBCD1Q8N539 461 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 OR5B17Q8NGF7 314 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 URGCPQ8TCY9 931 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 CCDC127Q96BQ5 260 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 LRCH3Q96II8 777 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 MFSD14AQ96MC6 490 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 C17orf80Q9BSJ5 609 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 CHD9Q3L8U1 2897 aa16.84■□□□□ 0.29
SMCO4-206ENST00000596676 PDCD11Q14690 1871 aaKnown RBP16.84■□□□□ 0.29
SMCO4-206ENST00000596676 CASTOR2A6NHX0 329 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
SMCO4-206ENST00000596676 CETN3O15182 167 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 THP07101 528 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 KCNE1P15382 129 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 DNAJB2P25686 324 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 SLC11A1P49279 550 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms