RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 NTPCRQ9BSD7 190 aaKnown RBP14.33□□□□□ -0.12
LIG1-212ENST00000596549 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 KCND2Q9NZV8 630 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 DOCK6Q96HP0 2047 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 TMEM189-UBE2V1I3L0A0 370 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 SLC26A4O43511 780 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 GLUD1P00367 558 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 MYBP10242 640 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 LONP1P36776 959 aaKnown RBP14.32□□□□□ -0.12
LIG1-212ENST00000596549 OSTNP61366 133 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 ZXDAP98168 799 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 PTPN21Q16825 1174 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 USP41Q3LFD5 358 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 XKR4Q5GH76 650 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 CD300LGQ6UXG3 332 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 HFE2Q6ZVN8 426 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 USP49Q70CQ1 688 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 ZBTB33Q86T24 672 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 GLYCTKQ8IVS8 523 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 RIN2Q8WYP3 895 aaPredicted RBP14.32□□□□□ -0.12
LIG1-212ENST00000596549 INTS4Q96HW7 963 aaKnown RBP14.32□□□□□ -0.12
LIG1-212ENST00000596549 RIPOR3Q96MK2 946 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 ZMAT2Q96NC0 199 aaKnown RBP14.32□□□□□ -0.12
LIG1-212ENST00000596549 HAPLN2Q9GZV7 340 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 FBXO2Q9UK22 296 aaPredicted RBP14.32□□□□□ -0.12
LIG1-212ENST00000596549 MTMR6Q9Y217 621 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 SSX2IPQ9Y2D8 614 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 RBM19Q9Y4C8 960 aaKnown RBP14.32□□□□□ -0.12
LIG1-212ENST00000596549 MYO10Q9HD67 2058 aa14.32□□□□□ -0.12
LIG1-212ENST00000596549 NOTCH4Q99466 2003 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 TADA2AO75478 443 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 RFPL2O75678 378 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 MCF2P10911 925 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
LIG1-212ENST00000596549 PDCP20941 246 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 UBA7P41226 1012 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 CLCNKBP51801 687 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 ZNF131P52739 623 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 MCM6Q14566 821 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 ALKAL1Q6UXT8 129 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 C15orf39Q6ZRI6 1047 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 GPBP1Q86WP2 473 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 GPR65Q8IYL9 337 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 PIK3R5Q8WYR1 880 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 RAD54LQ92698 747 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 KCNN1Q92952 543 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 CALML4Q96GE6 196 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 FIZ1Q96SL8 496 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 CCDC94Q9BW85 323 aaPredicted RBP14.31□□□□□ -0.12
LIG1-212ENST00000596549 SMOC2Q9H3U7 446 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 FNIP2Q9P278 1114 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 ANKFY1Q9P2R3 1169 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 HCN4Q9Y3Q4 1203 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 NR2E1Q9Y466 385 aa14.31□□□□□ -0.12
LIG1-212ENST00000596549 SMIM28A0A1B0GU29 152 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 TGM5O43548 720 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 PAPLNO95428 1278 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 SPATA31D3P0C874 917 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 MARCKSP29966 332 aaPredicted RBP14.3□□□□□ -0.12
LIG1-212ENST00000596549 DHX8Q14562 1220 aaKnown RBP14.3□□□□□ -0.12
LIG1-212ENST00000596549 NOLC1Q14978 699 aaKnown RBP eCLIP14.3□□□□□ -0.12
LIG1-212ENST00000596549 UPP1Q16831 310 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 SEZ6Q53EL9 994 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 FAM171A1Q5VUB5 890 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 LILRA6Q6PI73 481 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 ZPBP2Q6X784 338 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 SPATA31D4Q6ZUB0 917 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 PALB2Q86YC2 1186 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 TDRD5Q8NAT2 981 aaKnown RBP14.3□□□□□ -0.12
LIG1-212ENST00000596549 CMASQ8NFW8 434 aaPredicted RBP14.3□□□□□ -0.12
LIG1-212ENST00000596549 LNX1Q8TBB1 728 aaPredicted RBP14.3□□□□□ -0.12
LIG1-212ENST00000596549 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
LIG1-212ENST00000596549 ZNF707Q96C28 371 aaPredicted RBP14.3□□□□□ -0.12
LIG1-212ENST00000596549 ASIC4Q96FT7 647 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 EPSTI1Q96J88 318 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 USP28Q96RU2 1077 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 CCSER1Q9C0I3 900 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.3□□□□□ -0.12
LIG1-212ENST00000596549 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 TCHHQ07283 1943 aa14.3□□□□□ -0.12
LIG1-212ENST00000596549 ADAM12O43184 909 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 TOM1L1O75674 476 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 FGFR3P22607 806 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 BRCC3P46736 316 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 MCL1Q07820 350 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 STRN3Q13033 797 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 PSMD5Q16401 504 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 ATAT1Q5SQI0 421 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 CCDC149Q6ZUS6 474 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 APBB1IPQ7Z5R6 666 aaPredicted RBP14.29□□□□□ -0.12
LIG1-212ENST00000596549 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 TMEM130Q8N3G9 435 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 DDX27Q96GQ7 796 aaKnown RBP14.29□□□□□ -0.12
LIG1-212ENST00000596549 CLIC6Q96NY7 704 aa14.29□□□□□ -0.12
LIG1-212ENST00000596549 CLSTN3Q9BQT9 956 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms