RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PI4K2BG5E9Z4 385 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 TMEM189-UBE2V1I3L0A0 370 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 MEFVO15553 781 aaPredicted RBP14.29□□□□□ -0.12
USE1-207ENST00000596136 F13A1P00488 732 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 URODP06132 367 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 HSP90AA1P07900 732 aaKnown RBP14.29□□□□□ -0.12
USE1-207ENST00000596136 KCNE1P15382 129 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 GLUD2P49448 558 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 CLCN4P51793 760 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 GTF2BQ00403 316 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 ITIH3Q06033 890 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 CBX2Q14781 532 aaPredicted RBP14.29□□□□□ -0.12
USE1-207ENST00000596136 NOLC1Q14978 699 aaKnown RBP eCLIP14.29□□□□□ -0.12
USE1-207ENST00000596136 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 SV2BQ7L1I2 683 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 DNAJC19Q96DA6 116 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 UROC1Q96N76 676 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 ACAP3Q96P50 834 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 TCHPQ9BT92 498 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 HAPLN2Q9GZV7 340 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 ADAM7Q9H2U9 754 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 DZANK1Q9NVP4 752 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 CNTN3Q9P232 1028 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 FNIP2Q9P278 1114 aa14.29□□□□□ -0.12
USE1-207ENST00000596136 CASTOR2A6NHX0 329 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 MYMKA6NI61 221 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 LOC730098B7Z3J9 87 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 TEX28O15482 410 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 CLDN3O15551 220 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 TADA2AO75478 443 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 KIF4AO95239 1232 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 PAPLNO95428 1278 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 KRT18P05783 430 aaKnown RBP14.28□□□□□ -0.12
USE1-207ENST00000596136 EPCAMP16422 314 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 YARSP54577 528 aaKnown RBP14.28□□□□□ -0.12
USE1-207ENST00000596136 PKP1Q13835 747 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 UPP1Q16831 310 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
USE1-207ENST00000596136 CD300LGQ6UXG3 332 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 ZBTB33Q86T24 672 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 RABGGTAQ92696 567 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 DDX12PQ92771 950 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 SNX27Q96L92 541 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 ZMAT2Q96NC0 199 aaKnown RBP14.28□□□□□ -0.12
USE1-207ENST00000596136 PHF7Q9BWX1 381 aaPredicted RBP14.28□□□□□ -0.12
USE1-207ENST00000596136 STRA6Q9BX79 667 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
USE1-207ENST00000596136 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 SEL1LQ9UBV2 794 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 TRIOO75962 3097 aa14.28□□□□□ -0.12
USE1-207ENST00000596136 MTCL1Q9Y4B5 1905 aaKnown RBP14.27□□□□□ -0.12
USE1-207ENST00000596136 SF3B1O75533 1304 aaKnown RBP eCLIP14.27□□□□□ -0.12
USE1-207ENST00000596136 FRMD3A2A2Y4 597 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 K7ENM7 598 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 FAM189A1O60320 539 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 CUTAO60888 179 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 TBCAO75347 108 aaKnown RBP14.27□□□□□ -0.13
USE1-207ENST00000596136 PPP1R37O75864 691 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 ADRB2P07550 413 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 KLRC2P26717 231 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 SSTR3P32745 418 aaPredicted RBP14.27□□□□□ -0.13
USE1-207ENST00000596136 CA8P35219 290 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 OSTNP61366 133 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 SOX4Q06945 474 aaPredicted RBP14.27□□□□□ -0.13
USE1-207ENST00000596136 ELAVL2Q12926 359 aaKnown RBP14.27□□□□□ -0.13
USE1-207ENST00000596136 E2F4Q16254 413 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 KYAT1Q16773 422 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 SLC10A6Q3KNW5 377 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 GLRA4Q5JXX5 417 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 DCLRE1AQ6PJP8 1040 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 ZNF720Q7Z2F6 126 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 MAP4K3Q8IVH8 894 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 FBXL18Q96ME1 805 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 PLEKHA5Q9HAU0 1116 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 SLC38A7Q9NVC3 462 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 VWA8A3KMH1 1905 aa14.27□□□□□ -0.13
USE1-207ENST00000596136 PDCD11Q14690 1871 aaKnown RBP14.27□□□□□ -0.13
USE1-207ENST00000596136 A0A0B4J269 797 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 TTC26A0AVF1 554 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 C2CD2LO14523 706 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 ADH1AP07327 375 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 CLTAP09496 248 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 GAP43P17677 238 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 NMT1P30419 496 aaKnown RBP14.26□□□□□ -0.13
USE1-207ENST00000596136 STAT6P42226 847 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 CLCNKBP51801 687 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 CREMQ03060 361 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 RTP2Q5QGT7 225 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 KIAA1841Q6NSI8 718 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 SLC39A4Q6P5W5 647 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 LILRA6Q6PI73 481 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 DYMQ7RTS9 669 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 KCNG4Q8TDN1 519 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 HDAC7Q8WUI4 952 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 PIK3R5Q8WYR1 880 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 DDX27Q96GQ7 796 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms