RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ENPEPQ07075 957 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 CYP24A1Q07973 514 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 NOLC1Q14978 699 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 KYAT1Q16773 422 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 AAK1Q2M2I8 961 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 THNSL1Q8IYQ7 743 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 WNT8BQ93098 351 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 CCDC127Q96BQ5 260 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 TRIM44Q96DX7 344 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 NUP58Q9BVL2 599 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 PDZD7Q9H5P4 517 aa14.18□□□□□ -0.14
SHKBP1-209ENST00000595803 ITIH6Q6UXX5 1313 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 GRXCR1A8MXD5 290 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 KIAA0355O15063 1070 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 TLR3O15455 904 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 B4GALT4O60513 344 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CAND2O75155 1236 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 RPS6KA5O75582 802 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CHRNA1P02708 482 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 ADRB2P07550 413 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CTSHP09668 335 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 PBX1P40424 430 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 MGAT3Q09327 533 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CETN1Q12798 172 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 SYCP1Q15431 976 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 SURF1Q15526 300 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 FAM26DQ5JW98 314 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CRELD2Q6UXH1 353 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CCDC186Q7Z3E2 898 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CDR2LQ86X02 465 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 SLC35C1Q96A29 364 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 ERGIC2Q96RQ1 377 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 FNBP1Q96RU3 617 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 CDT1Q9H211 546 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 MMRN2Q9H8L6 949 aa14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 RBAKQ9NYW8 714 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 NOC2LQ9Y3T9 749 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-209ENST00000595803 ABLIM1O14639 778 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 GPR182O15218 404 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 N4BP1O75113 896 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 TRIM49P0CI25 452 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 TRIM49CP0CI26 452 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 GTF2H1P32780 548 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 GSDMDP57764 484 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 MCCD1P59942 119 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 DLG4P78352 724 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 NFX1Q12986 1120 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 TRIM14Q14142 442 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 PSMD6Q15008 389 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 TRIM71Q2Q1W2 868 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 DCAF4L1Q3SXM0 396 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 SEZ6Q53EL9 994 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 GBP6Q6ZN66 633 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 MICALL1Q8N3F8 863 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 CCDC155Q8N6L0 562 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 PARD3BQ8TEW8 1205 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 CPLX3Q8WVH0 158 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 TMEM40Q8WWA1 233 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 DHX38Q92620 1227 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 RPF1Q9H9Y2 349 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 CPSF3Q9UKF6 684 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-209ENST00000595803 MROH7Q68CQ1 1323 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 P4HA2O15460 535 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 NPTXRO95502 500 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 CLTAP09496 248 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 DLATP10515 647 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 TNNI1P19237 187 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 HOXA11P31270 313 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 FMO5P49326 533 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 OSTNP61366 133 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 KCNMA1Q12791 1236 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 TBX2Q13207 712 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 BFSP2Q13515 415 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 ZBTB41Q5SVQ8 909 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 ZNF618Q5T7W0 954 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 SLC27A1Q6PCB7 646 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 NEK11Q8NG66 645 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 PLEKHO2Q8TD55 490 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 CCDC51Q96ER9 411 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 ACAP3Q96P50 834 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 CRACR2AQ9BSW2 395 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 CCDC94Q9BW85 323 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 TRIM6Q9C030 488 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 ST3GAL5Q9UNP4 418 aa14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 PIN4Q9Y237 131 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-209ENST00000595803 WDFY4Q6ZS81 3184 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 LRRIQ3A6PVS8 624 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 AKR1B15C9JRZ8 316 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 PQBP1O60828 265 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 CKBP12277 381 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 ZSCAN20P17040 1043 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 TNFSF9P41273 254 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms