RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RBL2Q08999 1139 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 ARID5BQ14865 1188 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 FAM47CQ5HY64 1035 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 GDF6Q6KF10 455 aaPredicted RBP14.62□□□□□ -0.07
VMP1-217ENST00000593168 MPZL3Q6UWV2 235 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 SERINC5Q86VE9 423 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 CNGA4Q8IV77 575 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 TC2NQ8N9U0 490 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 PARD3BQ8TEW8 1205 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 CCDC51Q96ER9 411 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 PCMTD1Q96MG8 357 aaPredicted RBP14.62□□□□□ -0.07
VMP1-217ENST00000593168 SCLT1Q96NL6 688 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 NECAB3Q96P71 396 aaPredicted RBP14.62□□□□□ -0.07
VMP1-217ENST00000593168 FAM213AQ9BRX8 229 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 ANKFY1Q9P2R3 1169 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 CAPN11Q9UMQ6 739 aa14.62□□□□□ -0.07
VMP1-217ENST00000593168 SCN5AQ14524 2016 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 TRANK1O15050 2925 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 OGTO15294 1046 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 N4BP1O75113 896 aaKnown RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 MFAP3LO75121 409 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 DARSP14868 501 aaKnown RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 MYOGP15173 224 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 EIF4BP23588 611 aaKnown RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 CASP14P31944 242 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 GTF2H1P32780 548 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 CRYBB1P53674 252 aaPredicted RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 POU5F1Q01860 360 aaKnown RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 ITGA7Q13683 1181 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 KIZQ2M2Z5 673 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 C1orf220Q5T0J3 134 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 CRELD2Q6UXH1 353 aaPredicted RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 GBP6Q6ZN66 633 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 RSPH3Q86UC2 560 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 CCDC155Q8N6L0 562 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 VWCEQ96DN2 955 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 PPP1R16BQ96T49 567 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 SEZ6LQ9BYH1 1024 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 TTYH3Q9C0H2 523 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 TRPV6Q9H1D0 765 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 WNT8AQ9H1J5 351 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 MTIF3Q9H2K0 278 aaKnown RBP14.61□□□□□ -0.07
VMP1-217ENST00000593168 KCNF1Q9H3M0 494 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 MMRN2Q9H8L6 949 aa14.61□□□□□ -0.07
VMP1-217ENST00000593168 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.61□□□□□ -0.07
VMP1-217ENST00000593168 A0A1B0GUA9 196 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 TTC26A0AVF1 554 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 B4GALT5O43286 388 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 NRDCO43847 1150 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 FAM189A1O60320 539 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 B4GALT4O60513 344 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 TSPAN1O60635 241 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 ERLIN2O94905 339 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 TRIM49P0CI25 452 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 TRIM49CP0CI26 452 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 MCF2P10911 925 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 ARF4P18085 180 aaPredicted RBP14.6□□□□□ -0.07
VMP1-217ENST00000593168 TRIM21P19474 475 aaKnown RBP14.6□□□□□ -0.07
VMP1-217ENST00000593168 PLA2G5P39877 138 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 KLK7P49862 253 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 DLG4P78352 724 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 CLDN10P78369 228 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 TFF2Q03403 129 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 NCBP1Q09161 790 aaKnown RBP14.6□□□□□ -0.07
VMP1-217ENST00000593168 TMEM62Q0P6H9 643 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 CETN1Q12798 172 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 NOLC1Q14978 699 aaKnown RBP eCLIP14.6□□□□□ -0.07
VMP1-217ENST00000593168 PSMD6Q15008 389 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 SURF1Q15526 300 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 EXOC3L4Q17RC7 722 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 TMEM132AQ24JP5 1023 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 MICALL1Q8N3F8 863 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 CCDC112Q8NEF3 446 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 NEK11Q8NG66 645 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 PLEKHO2Q8TD55 490 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 CPLX3Q8WVH0 158 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 PANX2Q96RD6 677 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 OSMRQ99650 979 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 CELF4Q9BZC1 486 aaKnown RBP14.6□□□□□ -0.07
VMP1-217ENST00000593168 TMX1Q9H3N1 280 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 CDHR5Q9HBB8 845 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 PLCB1Q9NQ66 1216 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 ZKSCAN5Q9Y2L8 839 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 LUC7L2Q9Y383 392 aaKnown RBP14.6□□□□□ -0.07
VMP1-217ENST00000593168 NCOR1O75376 2440 aa14.6□□□□□ -0.07
VMP1-217ENST00000593168 M0QZ92 97 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 CSDE1O75534 798 aaKnown RBP14.59□□□□□ -0.07
VMP1-217ENST00000593168 BMP1P13497 986 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 AXLP30530 894 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 KRT9P35527 623 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 ACOT2P49753 483 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 ADKP55263 362 aaKnown RBP14.59□□□□□ -0.07
VMP1-217ENST00000593168 MRPS6P82932 125 aaKnown RBP14.59□□□□□ -0.07
VMP1-217ENST00000593168 ZBED6P86452 979 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 PPP3CAQ08209 521 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 LRMPQ12912 555 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 KYAT1Q16773 422 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms